Return to main results Retrieve Phyre Job Id

Job DescriptionP46846
Confidence26.99%DateThu Jan 5 12:04:19 GMT 2012
Rank235Aligned Residues81
% Identity17%Templatec1ml4A_
PDB info PDB header:transferaseChain: A: PDB Molecule:aspartate transcarbamoylase; PDBTitle: the pala-liganded aspartate transcarbamoylase catalytic subunit from2 pyrococcus abyssi
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   129130.........140.........150.........160.........170.........180.........190.........200........
Predicted Secondary structure 




































Query SS confidence 















































































Query Sequence  RGFNQSDLLCQPLSRWLHCQWDSEAVTRTRATATQHFLSARLRKRNLKNAFRLELPVQGRHMVIVDDVVTTGSTVAEIAQ
Query Conservation 




   

  
            
 
      
  

  

  
    
        
 






 




    
 
Alig confidence 







..











.























.......












.











Template Conservation 
       ..   
    



.

      



 



 

 
  .......
 
 
 


 


.     
  
   
Template Sequence  RHPKEGAA. . RLAAEVAEVPVI. NAGDGSNQHPTQTLLDLYTIKKEF. . . . . . . GRIDGLKIGLLGD. LKYGRTVHSLAE
Template Known Secondary structure  SSTT..T
SS
.TTS

S.......S
SSSS
.TTT
Template Predicted Secondary structure 


..



.








.......







.



Template SS confidence 















































































   107..110.... .....120...... ...130.........140.........150 .........160... ......170.....
 
   209210.........220
Predicted Secondary structure 



Query SS confidence 











Query Sequence  LLLRNGAAAVQV
Query Conservation   
   

  
  
Alig confidence 











Template Conservation       
  
 
 
Template Sequence  ALTFYDVELYLI
Template Known Secondary structure  GGGS
Template Predicted Secondary structure 


Template SS confidence 











   176...180.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions