Job Description P33345 Confidence 10.61% Date Thu Jan 5 11:51:46 GMT 2012 Rank 63 Aligned Residues 182 % Identity 15% Template c3ltjA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:alpharep-4; PDBTitle: structure of a new family of artificial alpha helicoidal repeat2 proteins (alpha-rep) based on thermostable heat-like repeats Resolution 1.80 Å

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		710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	A	L	T	G	L	L	P	A	A	P	G	K	A	G	E	A	Q	D	N	A	R	A	A	L	R	M	L	T	E	N	G	H	Q	P	L	L	Q	E	I	A	R	R	Y	N	Q	P	E	V	T	D	A	V	N	A	L	L	A	L	D	P	L	D	N	H	P	T	K	I	P	T	L	P	A	F	Y	Q	P	S	L
Query Conservation
Alig confidence																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	K	V	E	M	Y	I	K	N	L	Q	D	D	S	Y	Y	V	R	R	A	A	A	Y	A	L	G	K	I	G	D	E	R	A	V	E	P	L	I	K	A	L	K	D	E	D	A	W	V	R	R	A	A	A	D	A	L	G	Q	I	G	D	E	R	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure											T	T		S																		G	G	G								T	T		S	S																	G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	T	R	P	V	L	K	A	N	A	Q	S	L	P	D	S	A	L	L	H	L	G	E	M	L	R	F	P	Q	E	E	A	L	Y	P	G	L	L	Q	V	K	D	V	C	S	A	D	S	L	A	G	F	A	W	D	L	F	T	A	W	Q	T	A	G	A	P	S	K	E	S	W	A	F	T	A	L	G	V	L	G
Query Conservation
Alig confidence		.	.																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	V	E	P	L	I	K	A	L	K	D	E	D	G	W	V	R	Q	S	A	A	V	A	L	G	Q	I	G	D	E	R	A	V	E	P	L	I	K	A	L	K	D	E	D	W	F	V	R	I	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	F	A	L	G	E	I	G
Template Known Secondary structure		.	.								T	T		S	S																	G	G	G								T	T		S	S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T
Template Predicted Secondary structure		.	.																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
				83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.																					.	.	.	.	.	.	.	.	140
		870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	D	D	T	A	R	K	L	T	P	L	I	R	A	W	P	G	E	S	Q	H	K	R	A	T	V	G	L	D	I	L	A	A	I	G	S	D	I	A	L	M	Q	L	N	G	I	A	Q	K	L	K	F	K	A	L	Q	E	R	A	K	E	K	I	A	D
Query Conservation
Alig confidence														.	.	.	.																																.
Template Conservation														.	.	.	.																																.
Template Sequence		D	E	R	A	V	E	P	L	I	K	A	L	.	.	.	.	K	D	E	D	G	W	V	R	Q	S	A	A	D	A	L	G	E	I	G	G	E	R	V	R	A	A	M	E	K	L	A	.	E	T	G	T	G	F	A	R	K	V	A	V	N	Y	L	E	T
Template Known Secondary structure			G	G	G								T	.	.	.	.	T		S	S																S												.
Template Predicted Secondary structure														.	.	.	.																																.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.					.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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