Job Description P33345 Confidence 8.90% Date Thu Jan 5 11:51:46 GMT 2012 Rank 80 Aligned Residues 49 % Identity 18% Template c1ocuA_ PDB info PDB header:sorting protein Chain: A: PDB Molecule:sorting nexin; PDBTitle: crystal structure of the yeast px-domain protein grd19p2 (sorting nexin 3) complexed to3 phosphatidylinosytol-3-phospahte. Resolution 2.3 Å

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		1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.																.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	N	R	Y	K	L	L	K	K	D	A	R	T	I	A	A	Q	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	R	L	E	S	A	M	C	L	R	R	R	W	S	L	E	N	F	Q	L	F	L	V	E	H	P	L	V	R	H
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	S	D	F	E	F	F	R	K	L	I	K	E	I	S	M	L	N	H	P	K	V	M	V	P	H	L	P	G	K	I	L	L	S	N	R	F	S	N	E	V	I	E	E	R	R	Q	G	L	N	T	W	M	Q	S	V	A	G	H	P	L	L	Q	S
Template Known Secondary structure																		T	T		T	T							S					T	T	G	G	G	S																				T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions