Return to main results Retrieve Phyre Job Id

Job DescriptionP0A853
Confidence100.00%DateThu Jan 5 11:06:55 GMT 2012
Rank1Aligned Residues465
% Identity100%Templated2v1pa1
SCOP infoPLP-dependent transferase-like PLP-dependent transferases Beta-eliminating lyases
Resolution1.9

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60.........70.........80....
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Query Sequence  KHLPEPFRIRVIEPVKRTTRAYREEAIIKSGMNPFLLDSEDVFIDLLTDSGTGAVTQSMQAAMMRGDEAYSGSRSYYALA
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Template Conservation     
 
      
         

      
 
   
      


 


 
         

  

  

 
 
   

Template Sequence  KHLPEPFRIRVIEPVKRTTRAYREEAIIKSGMNPFLLDSEDVFIDLLTDSGTGAVTQSMQAAMMRGDEAFSGSRSYYALA
Template Known Secondary structure 




SS











TTS
GGGS
GGG
S
S

TT
S


TTS



SSS
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   5....10.........20.........30.........40.........50.........60.........70.........80....
 
   85....90.........100.........110.........120.........130.........140.........150.........160....
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Query Sequence  ESVKNIFGYQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVR
Query Conservation 
  
 
 
 
  
   


 
  

       
                 
  
  
 
   
     
           
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Template Conservation 
  
 
 
 
  
   


 

  
       
  
      
  
                
                 
Template Sequence  ESVKNIFGYQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVR
Template Known Secondary structure  T

S
SSTTT


TTT
SS

TT

B
TTTT
TTS
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   85....90.........100.........110.........120.........130.........140.........150.........160....
 
   165....170.........180.........190.........200.........210.........220.........230.........240....
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Query Sequence  YDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAE
Query Conservation      
 

   
   
          
 
    
  

       
  
  

   
  
  
 

             
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Template Conservation    
 
 

   
   
          
 
    
  

       
  
       
     
 

             
Template Sequence  YDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAE
Template Known Secondary structure 
TTTT
B

GGG


SSB
GGG
B


TT


TT
GG
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   165....170.........180.........190.........200.........210.........220.........230.........240....
 
   245....250.........260.........270.........280.........290.........300.........310.........320....
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Query Sequence  YKDWTIEQITRETYKYADMLAMSAKKDAMVPMGGLLCMKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYD
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Template Conservation          
       

  
 
  
      

 
   
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Template Sequence  YKDWTIEQITRETYKYADMLAMSAKKDAMVPMGGLLCMKDDSFFDVYTECRTL. VVQEGFPTYGGLEGGAMERLAVGLYD
Template Known Secondary structure  GTTS
GGG
SSSSTT

SS

SGGG
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TTSS






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   245....250.........260.........270.........280.........290....... ..300.........310.........320...
 
   325....330.........340.........350.........360.........370.........380.........390.........400....
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Query Sequence  GMNLDWLAYRIAQVQYLVDGLEEIGVVCQQAGGHAAFVDAGKLLPHIPADQFPAQALACELYKVAGIRAVEIGSFLLGRD
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Template Conservation     
     
      
 
 
   
 
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Template Sequence  GMNLDWLAYRIAQVQYLVDGLEEIGVVQ. QAGGHAAFVDAGKLLPHIPADQFPAQALACELYKVAGIRAVEIGSFLLGRD
Template Known Secondary structure  TT
TT


.
SS
STTS
GGG


S
B
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   325....330.........340.........350.. .......360.........370.........380.........390.........400...
 
   405....410.........420.........430.........440.........450.........460.........470.
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Query Sequence  PKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKENAANIKGLTFTYEPKVLRHFTAKLKEV
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Template Conservation     
         


 


   
 
 

 




  
      
  
    
   

 
       
Template Sequence  PKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKENAANIKGLTFTYEPKVLRHFTAKLKEV
Template Known Secondary structure  TTT
SB


S




TTT

TGGG




SSS

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   405....410.........420.........430.........440.........450.........460.........470.
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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