Job Description P0A853 Confidence 99.66% Date Thu Jan 5 11:06:55 GMT 2012 Rank 233 Aligned Residues 312 % Identity 13% Template d2f8ja1 SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like Resolution 2.40

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		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.					.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.						.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.																										.	.	.	.	.
Query SS confidence																																	.	.	.	.																										.	.	.	.	.
Query Sequence		P	F	L	L	D	S	E	D	V	F	I	D	L	L	T	D	S	G	T	G	A	V	T	Q	S	M	Q	A	A	M	M	.	.	.	.	R	G	D	E	A	Y	S	G	S	R	S	Y	Y	A	L	A	E	S	V	K	N	I	F	G	Y	.	.	.	.	.	Q	Y	T	I	P	T	H	Q	G	R	G	A	E	Q	I
Query Conservation																																	.	.	.	.																										.	.	.	.	.
Alig confidence											.																						.	.	.	.																										.	.	.	.	.
Template Conservation											.
Template Sequence		P	Y	E	T	E	K	R	D	K	.	T	Y	L	A	L	N	E	N	P	F	P	F	P	E	D	L	V	D	E	V	F	R	R	L	N	S	D	A	L	R	I	Y	Y	D	S	P	D	E	E	L	I	E	K	I	L	S	Y	L	D	T	D	F	L	S	K	N	N	V	S	V	G	N	G	A	D	E	I	I	Y	V
Template Known Secondary structure										S	.				S	S				S	S																T	T	G	G	G	S				S	S													T		S	S			G	G	G
Template Predicted Secondary structure											.
Template SS confidence
		13	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	I	P	V	L	I	K	K	R	E	Q	E	K	G	L	D	R	S	K	M	V	A	F	S	N	Y	F	F	D	T	T	Q	G	H	S	Q	I	N	G	C	T	V	R	N	V	Y	I	K	E	A	F	D	T	G	V	R	Y	D	F	K	G	N	F	D	L	E	G	L	E	R	G	I	E	E	V	G	P	N	N	V
Query Conservation
Alig confidence						.	.	.	.										.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.										.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	M	L	M	.	.	.	.	F	D	R	S	V	F	F	P	P	.	.	.	.	.	.	.	.	.	T	Y	S	C	Y	R	I	F	A	K	A	V	G	A	K	F	L	E	V	P	L	T	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	R	I	P	E	V	N	V	G	E	G
Template Known Secondary structure						.	.	.	.	S	S						S	S	.	.	.	.	.	.	.	.	.													T										T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S									T	T
Template Predicted Secondary structure						.	.	.	.										.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		92	.	.	.					.	.	.	.	100	.	.	.	.										.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.																				.	.	130	.	.	.	.	.	.	.	.	.
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Y	I	V	A	T	I	T	S	N	S	A	G	G	Q	P	V	S	L	A	N	L	K	A	M	Y	S	I	A	K	K	Y	D	I	P	V	V	M	D	S	A	R	F	A	E	N	A	Y	F	I	K	Q	R	E	A	E	Y	K	D	W	T	I	E	Q	I	T	R	E	T	Y	K	Y	A	D	M	L	A	M	S	A
Query Conservation
Alig confidence																			.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	V	V	F	I	P	N	P	N	N	P	T	G	H	V	F	E	.	.	.	.	.	R	E	E	I	E	R	I	L	K	T	G	A	F	V	A	L	D	E	A	Y	Y	.	.	.	.	.	.	.	.	.	.	.	.	E	F	H	G	E	S	Y	V	D	F	L	K	K	Y	E	N	L	A	V	I	R	T	F	S	K
Template Known Secondary structure								S	S		T	T	T						.	.	.	.	.									T	T	T								T	T	G	.	.	.	.	.	.	.	.	.	.	.	.	G	G	T					G	G	G	G	G	T		S	S							S	T	T
Template Predicted Secondary structure																			.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.						.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.													.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	D	A	M	V	P	M	G	G	L	L	C	M	K	D	D	S	F	F	D	V	Y	T	E	C	R	T	L	C	V	V	Q	E	G	F	P	T	Y	G	G	L	E	G	G	A	M	E	R	L	A	V	G	L	Y	D	G	M	N	L	D	W	L	A	Y	R	I	A	Q	V	Q	Y	L	V	D	G	L	E	E	I
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.
Template Sequence		A	F	S	L	A	A	Q	R	V	G	Y	V	V	A	S	E	K	F	I	D	A	Y	N	R	V	.	.	.	.	.	.	.	.	.	.	R	L	P	F	N	V	S	Y	V	S	Q	M	F	A	K	V	A	L	D	H	R	E	I	F	E	E	R	T	K	F	I	V	E	E	R	E	R	M	K	S	A	L	R	E	M
Template Known Secondary structure		T	S	S		T	T	T																			.	.	.	.	.	.	.	.	.	.	S		T	T		S														T
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.											.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	V	C	Q	Q	A	G	G	H	A	A	F	V	D	A	G	K	L	L	P	H	I	P	A	D	Q	F	P	A	Q	A	L	A	C	E	L	Y	K	V	A	G	I	R	A	V	E	I	G	S	F	L	L	G	R	D	P	K	T	G	K	Q	L	P	C	P	A	E	L	L	R	L	T	I	P	R	A	T	Y	T
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.												.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.												.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.
Template Sequence		G	Y	R	I	T	D	S	R	G	N	F	V	F	V	F	M	E	K	.	.	.	.	.	.	.	.	.	E	E	K	E	R	L	L	E	H	L	R	.	T	K	N	V	A	V	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	F	R	E	G	V	R	I	T	I	G	.	.	.	.	K
Template Known Secondary structure		T								S	S									.	.	.	.	.	.	.	.	.												.		T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T								.	.	.	.
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.												.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290										.	.	.	.	.	.	.	.	.	300	.		.	.	.	.	.	.	.																			.	310	.	.	.	.	.	.	.	.	.					320
		429	430	.	.	.	.	.	.	.	.	.	440	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	T	H	M	D	F	I	I	E	A	F	K	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	E	E	N	D	M	I	L	R	E	L	E	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions