Job Description P0A853 Confidence 99.85% Date Thu Jan 5 11:06:55 GMT 2012 Rank 178 Aligned Residues 308 % Identity 16% Template d2csta_ SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like Resolution 1.90

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		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.											.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.								.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.
Query Sequence		Y	S	G	S	R	S	Y	Y	A	L	A	E	S	V	K	N	I	F	.	.	.	.	.	.	.	.	.	.	G	Y	Q	Y	T	I	P	T	H	Q	G	R	G	A	E	Q	I	Y	I	P	V	L	.	.	.	.	.	.	.	I	K	K	R	E	Q	E	K	G	L	D	R	S	K	M	V	A	F	S	N	Y	F	F
Query Conservation																				.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.	.	.	.	.
Template Sequence		Y	L	P	I	L	G	L	P	E	F	R	A	N	A	S	R	I	A	L	G	D	D	S	P	A	I	A	Q	K	R	V	G	S	V	Q	G	L	G	G	T	G	A	L	R	I	G	A	E	F	L	R	R	W	Y	N	G	N	N	N	T	A	T	P	V	Y	V	S	S	P	.	.	.	.	.	.	.	.	.	T	W
Template Known Secondary structure					T	T																T	T						T	T																									S	S	S	S	S		T	T	S						S	S	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.										.	140
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	T	T	Q	G	H	S	Q	I	N	G	C	T	V	R	N	V	Y	I	K	E	A	F	D	T	G	V	R	Y	D	F	K	G	N	F	D	L	E	G	L	E	R	G	I	E	E	V	G	P	N	N	V	P	Y	I	V	A	T	I	T	S	N	S	A	G	G	Q	P	V	S	L	A	N	L	K	A	M	Y	S	I
Query Conservation
Alig confidence																							.	.	.	.	.	.	.																					.																.
Template Conservation																							.	.	.	.	.	.	.																					.																.
Template Sequence		E	N	H	N	S	V	F	M	D	A	G	F	K	D	I	R	T	Y	R	Y	W	.	.	.	.	.	.	.	D	A	A	K	R	G	L	D	L	Q	G	L	L	D	D	M	E	K	A	P	.	E	F	S	I	F	I	L	H	A	C	A	H	N	P	T	.	G	T	D	P	T	P	D	E	W	K	Q	I	A	A	V
Template Known Secondary structure		T									T	T											.	.	.	.	.	.	.		T	T	T	T													T	S		.	T	T							S	S	S		T	T	T	.
Template Predicted Secondary structure																							.	.	.	.	.	.	.																					.																.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.								.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.						.	.	.	.	.	.	.	270	.	.	.	.	.	.			.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.															.	.
Query SS confidence																																																.	.	.	.	.															.	.
Query Sequence		A	K	K	Y	D	I	P	V	V	M	D	S	A	R	F	A	E	N	A	Y	F	I	K	Q	R	E	A	E	Y	K	D	W	T	I	E	Q	I	T	R	E	T	Y	K	Y	A	D	.	.	.	.	.	M	L	A	M	S	A	K	K	D	A	M	V	P	M	.	.	G	G	L	L	C	M	K	D	D	S	F	F	D
Query Conservation																																																.	.	.	.	.															.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.															.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	K	R	R	C	L	F	P	F	F	D	S	A	Y	Q	.	.	.	.	.	.	.	.	.	.	.	.	G	F	A	S	G	S	L	D	K	D	A	W	A	V	R	Y	F	V	S	E	G	F	E	L	F	C	A	Q	S	F	S	K	N	F	G	L	Y	N	E	R	V	G	N	L	S	V	V	G	K	D	E	D	N
Template Known Secondary structure						T								S		T	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T	T	S						T									T	T										T	T	T	S			G	G	G										S	S
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.													.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.							.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.						.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.																															.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.																															.	.	.	.	.
Query Sequence		V	Y	T	E	C	R	T	L	C	V	V	Q	E	G	F	P	T	Y	G	G	L	E	G	G	A	M	E	R	L	A	V	G	.	.	.	.	.	.	L	Y	D	G	M	N	L	D	W	L	A	Y	R	I	A	Q	V	Q	Y	L	V	D	G	L	E	E	I	G	V	V	.	.	.	.	.	C	Q	Q	A	G	G	H
Query Conservation																																		.	.	.	.	.	.																															.	.	.	.	.
Alig confidence																																		.	.	.	.	.	.																															.	.	.	.	.
Template Conservation
Template Sequence		V	Q	R	V	L	S	Q	M	E	K	I	V	R	T	T	W	S	N	P	P	S	Q	G	A	R	I	V	A	T	T	L	T	S	P	Q	L	F	A	E	W	K	D	N	V	K	T	M	A	D	R	V	L	L	M	R	S	E	L	R	S	R	L	E	S	L	G	T	P	G	T	W	N	H	I	T	D	Q	I	G	M
Template Known Secondary structure															T	T	T	S	S			S																																													T		S	S			T							S	S
Template Predicted Secondary structure
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
		359	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	F	V	D	A	G	K	L	L	P	H	I	P	A	D	Q	F	P	A	Q	A	L	A	C	E	L	Y	K	V	A	G	I	R	A	V	E	I	G	S	F	L	L	G	R	D	P	K	T	G	K	Q	L	P	C	P	A	E	L	L	R	L	T	I	P	R	A	T	Y	T	Q	T	H	M	D	F	I	I	E	A
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.
Template Sequence		F	S	F	T	G	L	N	P	.	.	.	.	.	.	.	.	.	.	.	.	.	K	Q	V	E	Y	M	I	K	E	K	H	I	Y	L	M	A	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	I	N	M	.	.	C	G	L	T	T	K	N	L	D	Y	V	A	K	S
Template Known Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.									T	T						T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				G	.	.	G	G			T	T	T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.
Template SS confidence
		360	.	.	.	.	.	.	.														.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.																						.	.	.	.			390	.	.	.	.	.	.	.	.	.	400	.	.	.
		439	440	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	K	H	V	K	E	N	A	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	H	E	A	V	T	K	I	Q
Template Known Secondary structure									T
Template Predicted Secondary structure
Template SS confidence
		404	.	.	.	.	.	410	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions