Job Description P0A853 Confidence 99.91% Date Thu Jan 5 11:06:55 GMT 2012 Rank 101 Aligned Residues 335 % Identity 16% Template d2ch1a1 SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 2.4

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		55	.	.	.	.	60	.	.	.	.	.	.	.	.				.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.				.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.																												.	.	.
Query SS confidence																.	.	.																												.	.	.
Query Sequence		G	T	G	A	V	T	Q	S	M	Q	A	A	M	M	.	.	.	R	G	D	E	A	Y	S	G	S	R	S	Y	Y	A	L	A	E	S	V	K	N	I	F	G	Y	Q	Y	.	.	.	T	I	P	T	H	Q	G	R	G	A	E	Q	I	Y	I	P	V	L	I	K	K	R	E	Q	E	K	G	L	D	R	S	K	M
Query Conservation																.	.	.																												.	.	.
Alig confidence																.	.	.																												.	.	.																																	.
Template Conservation																																																																																	.
Template Sequence		G	P	S	N	C	S	K	R	V	L	T	A	M	T	N	T	V	L	S	N	F	H	A	E	L	F	R	T	M	D	E	V	K	D	G	L	R	Y	I	F	Q	T	E	N	R	A	T	M	C	V	S	G	S	A	H	A	G	M	E	A	M	L	S	N	L	L	E	E	G	D	R	V	L	I	A	V	N	G	I	.
Template Known Secondary structure		S	S											T	T	S					T	T																				T				S						S	S																T	T								S	S		.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	F	S	N	Y	F	F	D	T	T	Q	G	H	S	Q	I	N	G	C	T	V	R	N	V	Y	I	K	E	A	F	D	T	G	V	R	Y	D	F	K	G	N	F	D	L	E	G	L	E	R	G	I	E	E	V	G	P	N	N	V	P	Y	I	V	A	T	I	T	S	N	S	A	G	G	Q	P	V	S	L	A
Query Conservation
Alig confidence		.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.																.	.	.																	.	.	.	.
Template Conservation		.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.																.	.	.																	.	.	.	.
Template Sequence		.	.	.	.	.	.	W	A	E	R	A	V	E	M	S	E	R	Y	G	A	D	V	R	T	I	E	G	P	P	.	.	.	.	.	.	.	.	.	.	D	R	P	F	S	L	E	T	L	A	R	A	I	E	L	.	.	.	H	Q	P	K	C	L	F	L	T	H	G	D	S	S	S	G	.	.	.	.	L	L	Q
Template Known Secondary structure		.	.	.	.	.	.												T	T										T	.	.	.	.	.	.	.	.	.	.	T	S														.	.	.				S						S			T	T	T	T	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.																.	.	.																	.	.	.	.
Template SS confidence
								104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.											.	.	.	130	.	.	.	.	.	.	.	.	.	140	.				.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.					.	.	160
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	K	A	M	Y	S	I	A	K	K	Y	D	I	P	V	V	M	D	S	A	R	F	A	E	N	A	Y	F	I	K	Q	R	E	A	E	Y	K	D	W	T	I	E	Q	I	T	R	E	T	Y	K	Y	A	D	M	L	A	M	S	A	K	K	D	A	M	V	P	M	G	G	L	L	C	M	K	D	D	S	F	F
Query Conservation
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	L	E	G	V	G	Q	I	C	H	Q	H	D	C	L	L	I	V	D	A	V	A	S	L	C	G	V	P	F	Y	M	D	K	W	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	D	A	V	Y	T	G	A	Q	V	L	G	A	P	P	G	I	T	P	I	S	I	S	P	K	A	L	D
Template Known Secondary structure				T	T								T	T								T	T	T	B	T	T	B				T	T	T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															S	S
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.																		.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		289	290															.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.				.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.
Query Sequence		D	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	T	E	C	R	T	L	C	V	V	Q	E	G	F	P	T	Y	G	G	L	E	G	G	A	M	E	R	L	A	V	G	L	Y	D	G	M	N	.	.	.	L	D	W	L	A	Y	R	I	A	Q	V	Q	Y	L	V	D	G	L	E	E	I	G	V	V
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.
Template Conservation
Template Sequence		V	I	R	N	R	R	T	K	S	K	V	F	Y	W	D	L	L	L	L	G	N	Y	W	G	C	Y	D	E	P	K	R	Y	H	H	T	V	A	S	N	L	I	F	A	L	R	E	A	L	A	Q	I	A	E	E	G	L	E	N	Q	I	K	R	R	I	E	C	A	Q	I	L	Y	E	G	L	G	K	M	G	L	D
Template Known Secondary structure					T		S	S			S		G	G	G									T	T		S	S	S																																																		T
Template Predicted Secondary structure
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	Q	Q	A	G	G	H	A	A	F	V	D	A	G	K	L	L	P	H	I	P	A	D	Q	F	P	A	Q	A	L	A	C	E	L	Y	K	V	A	G	I	R	A	V	E	I	G	S	F	L	L	G	R	D	P	K	T	G	K	Q	L	P	C	P	A	E	L	L	R	L	T	I	P	R	A	T	Y	T	Q	T	H
Query Conservation
Alig confidence											.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	F	V	K	D	P	R	H	R	.	.	.	L	P	T	V	T	G	I	M	I	P	K	G	V	D	W	W	K	V	S	Q	Y	A	M	N	N	F	S	L	E	V	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	L	G	P	T	F	G	K	A	W	R	V	G	I	M	G	E	C	S	T	V	Q	K
Template Known Secondary structure		B	S	S		S	G	G	G	B	.	.	.		T	T								T	T																B			B	.	.	.	.	.	.	.	.	.	.	.	.	.				G	G	G	T	T	T								G	G	G		S
Template Predicted Secondary structure											.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		305	.	.	.	.	310	.	.	.				.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.														.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
		432	.	.	.	.	.	.	.	440	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	D	F	I	I	E	A	F	K	H	V	K	E	N	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	Q	F	Y	L	Y	G	F	K	E	S	L	K	A	T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		369	370	.	.	.	.	.	.	.	.	.	380	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions