Job Description P0A853 Confidence 99.81% Date Thu Jan 5 11:06:55 GMT 2012 Rank 204 Aligned Residues 343 % Identity 11% Template d2bkwa1 SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 2.57

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		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.				.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.							.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.				.	.	.
Predicted Secondary structure																					.	.	.																										.	.	.	.	.	.																						.	.	.
Query SS confidence																					.	.	.																										.	.	.	.	.	.																						.	.	.
Query Sequence		L	L	T	D	S	G	T	G	A	V	T	Q	S	M	Q	A	A	M	M	.	.	.	R	G	D	E	A	Y	S	G	S	R	S	Y	Y	A	L	A	E	S	V	K	N	I	F	G	Y	.	.	.	.	.	.	Q	Y	T	I	P	T	H	Q	G	R	G	A	E	Q	I	Y	I	P	V	L	I	.	.	.	K	K	R
Query Conservation																					.	.	.																										.	.	.	.	.	.																						.	.	.
Alig confidence											.										.	.	.																										.	.	.	.	.	.																						.	.	.
Template Conservation											.
Template Sequence		L	L	I	P	G	P	I	I	L	.	S	G	A	V	Q	K	A	L	D	V	P	S	L	G	H	T	S	P	E	F	V	S	I	F	Q	R	V	L	K	N	T	R	A	V	F	K	S	A	A	A	S	K	S	Q	P	F	V	L	A	G	S	G	T	L	G	W	D	I	F	A	S	N	F	I	L	S	K	A	P	N
Template Known Secondary structure				S	S	S	S				.							T	T	S						T	T	S																		T	T			G	G	G	T								S		T	T											S		T	T		S
Template Predicted Secondary structure											.
Template SS confidence
		8	.	10	.	.	.	.	.	.		.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	E	K	G	L	D	R	S	K	M	V	A	F	S	N	Y	F	F	D	T	T	Q	G	H	S	Q	I	N	G	C	T	V	R	N	V	Y	I	K	E	A	F	D	T	G	V	R	Y	D	F	K	G	N	F	D	L	E	G	L	E	R	G	I	E	E	V	G	P	N	N	V	P	Y	I	V	A	T	I	T	S
Query Conservation
Alig confidence												.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.																.	.	.	.
Template Conservation												.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.																.	.	.	.
Template Sequence		K	N	V	L	V	V	S	T	G	T	.	.	.	.	.	.	.	F	S	D	R	F	A	D	C	L	R	S	Y	G	A	Q	V	D	V	V	R	P	L	K	I	.	.	.	.	.	.	.	.	.	G	E	S	V	P	L	E	L	I	T	E	K	L	S	Q	.	.	.	.	N	S	Y	G	A	V	T	V	T	H	V
Template Known Secondary structure									S	S		.	.	.	.	.	.	.												T	T									S	S	T	.	.	.	.	.	.	.	.	.	T	S														.	.	.	.	S			S						S
Template Predicted Secondary structure												.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.																.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.								.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120										.	.	.	.	.	.	.	.	.	130	.	.	.	.	.					.	.	.	.	140	.	.	.	.	.	.
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S	A	G	G	Q	P	V	S	L	A	N	L	K	A	M	Y	S	I	A	K	K	Y	D	I	P	V	V	M	D	S	A	R	F	A	E	N	A	Y	F	I	K	Q	R	E	A	E	Y	K	D	W	T	I	E	Q	I	T	R	E	T	Y	K	Y	A	D	M	L	A	M	S	A	K	K	D	A	M	V	P	M	G
Query Conservation
Alig confidence																				.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	T	S	T	A	V	L	S	D	L	K	A	I	S	Q	A	I	K	.	Q	T	S	P	E	T	F	F	V	V	D	A	V	C	S	I	G	C	E	E	F	E	F	D	E	W	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	F	A	L	T	A	S	Q	A	I	G	A	P	A	G	L
Template Known Secondary structure			T	T	T	T														.				T	T	S							T	T	T	T	T	T	S				T	T	T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S													S
Template Predicted Secondary structure																				.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.																		.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.																		.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.				.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.
Query Sequence		G	L	L	C	M	K	D	D	S	F	F	D	V	Y	T	E	C	R	T	L	C	V	V	Q	E	G	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	T	Y	G	G	L	E	G	G	A	M	E	R	L	A	V	G	L	Y	D	G	M	N	.	.	.	L	D	W	L	A	Y	R	I	A	Q
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.
Template Conservation
Template Sequence		S	I	S	L	C	S	S	R	F	X	D	Y	A	L	N	D	S	K	N	G	H	V	H	G	Y	F	S	S	L	R	R	W	T	P	I	X	E	N	Y	E	A	G	K	G	A	Y	F	A	T	P	P	V	Q	L	I	N	S	L	D	V	A	L	K	E	I	L	E	E	G	L	H	K	R	W	D	L	H	R	E	X
Template Known Secondary structure															T									S		S	T	T														T	T					S	S
Template Predicted Secondary structure
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Q	Y	L	V	D	G	L	E	E	I	G	V	V	C	Q	Q	A	G	G	H	A	A	F	V	D	A	G	K	L	L	P	H	I	P	A	D	Q	F	P	A	Q	A	L	A	C	E	L	Y	K	V	A	G	I	R	A	V	E	I	G	S	F	L	L	G	R	D	P	K	T	G	K	Q	L	P	C	P	A	E	L
Query Conservation
Alig confidence																							.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	D	W	F	K	D	S	L	V	N	G	L	Q	L	T	S	V	S	R	Y	P	.	.	.	.	.	S	N	X	S	A	H	G	L	T	A	V	Y	V	A	D	P	P	D	V	I	A	F	L	K	S	H	G	V	V	.	.	.	.	.	.	.	.	.	.	.	.	I	A	G	G	I	H	K	D	I	G	P	K	Y
Template Known Secondary structure											T	T	T					S	S		S	S	.	.	.	.	.	S	T	T	B		S	S							S												T	T			.	.	.	.	.	.	.	.	.	.	.	.		B					T	T	T	G	G	G
Template Predicted Secondary structure																							.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310						.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.													340	.	.	.	.	.	.	.	.	.	350	.	.
		418	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	L	T	I	P	R	A	T	Y	T	Q	T	H	M	D	F	I	I	E	A	F	K	H	V	K	E	N	A	A	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	R	I	G	H	X	G	V	T	A	C	N	K	N	L	P	Y	X	K	N	C	F	D	L	I	K	L	A	L	Q	R
Template Known Secondary structure								G	G	G	T	S	S	T	T		T													T	T
Template Predicted Secondary structure
Template SS confidence
		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions