Job Description P0A853 Confidence 99.94% Date Thu Jan 5 11:06:55 GMT 2012 Rank 75 Aligned Residues 297 % Identity 14% Template d1wyua1 SCOP info PLP-dependent transferase-like PLP-dependent transferases Glycine dehydrogenase subunits (GDC-P) Resolution 2.10

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		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.			.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.																		.
Query SS confidence																		.	.																		.
Query Sequence		Y	A	L	A	E	S	V	K	N	I	F	G	Y	Q	Y	T	.	.	I	P	T	H	Q	G	R	G	A	E	Q	I	Y	I	P	V	L	.	I	K	K	R	E	Q	E	K	G	L	D	R	S	K	M	V	A	F	S	N	Y	F	F	D	T	T	Q	G	H	S	Q	I	N	G	C	T	V	R	N	V	Y	I	K	E
Query Conservation																		.	.																		.
Alig confidence																		.	.																		.																.	.	.	.	.
Template Conservation																																																					.	.	.	.	.
Template Sequence		F	E	Y	Q	T	M	I	A	E	L	A	G	L	E	I	A	N	A	S	M	Y	D	G	A	T	A	L	A	E	G	V	L	L	A	L	R	E	T	G	R	M	G	V	L	V	S	Q	G	V	H	P	.	.	.	.	.	E	Y	R	A	V	L	R	A	Y	L	E	A	V	G	A	K	L	L	T	L	P	L	E	G
Template Known Secondary structure													T	S	S				S		B	S	S																	T								T	T	S			.	.	.	.	.													T	T									B	T
Template Predicted Secondary structure																																																					.	.	.	.	.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.						.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	D	T	G	V	R	Y	D	F	K	G	N	F	D	L	E	G	L	E	R	G	I	E	E	V	G	P	N	N	V	P	Y	I	V	A	T	I	T	S	N	S	A	G	G	Q	P	V	S	L	A	N	L	K	A	M	Y	S	I	A	K	K	Y	D	I	P	V	V	M	D	S	A	R	F	A	E	N	A	Y	F
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.																.	.						.	.	.																								.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.																.	.						.	.	.																								.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	G	R	T	P	L	P	E	V	.	.	.	.	.	.	.	.	G	E	E	V	G	A	V	V	V	Q	N	P	N	F	L	.	.	G	A	L	E	D	.	.	.	L	G	P	F	A	E	A	A	H	G	A	G	A	L	F	V	A	V	A	D	P	L	S	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	T	B							.	.	.	.	.	.	.	.		T	T								S	S		T	T	.	.	S	B				.	.	.											T	T									T	T	G	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.																.	.						.	.	.																								.	.	.	.	.
Template SS confidence
													186	.	.	.	190	.	.	.									.	.	.	.	.	.	200	.	.	.	.	.	.	.	.			.	210	.	.	.				.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	K	Q	R	E	A	E	Y	K	D	W	T	I	E	Q	I	T	R	E	T	Y	K	Y	A	D	M	L	A	M	S	A	K	K	D	A	M	V	P	M	G	G	L	L	C	M	K	D	D	S	F	F	D	V	Y	T	E	C	R	T	L	C	V	V	Q	E	G	F	P	T	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																							.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																.																																																.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.																.
Template Sequence		.	.	.	.	.	.	L	G	V	L	K	P	P	G	A	Y	G	A	D	I	A	.	V	G	D	G	Q	S	L	G	L	P	M	G	F	G	G	P	H	F	G	F	L	A	T	K	K	A	F	V	R	Q	L	P	G	R	L	V	S	E	T	V	D	V	E	G	R	R	G	F	I	L	T	L	Q	A	R	E	Q	Y
Template Known Secondary structure		.	.	.	.	.	.	G	G	T	S							T		S			.					T	T	T	T				G	G	G		S									G	G	G	G	G	G			S									T	T	S									G	G	G	S
Template Predicted Secondary structure		.	.	.	.	.	.																.
Template SS confidence
								237	.	.	240	.	.	.	.	.	.	.	.	.	250	.		.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
											307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.				.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.		.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																						.	.	.																						.
Query SS confidence		.	.	.	.	.	.	.	.	.																						.	.	.																						.
Query Sequence		.	.	.	.	.	.	.	.	.	Y	G	G	L	E	G	G	A	M	E	R	L	A	V	G	L	Y	D	G	M	N	.	.	.	L	D	W	L	A	Y	R	I	A	Q	V	Q	Y	L	V	D	G	L	E	E	I	.	G	V	V	C	Q	Q	A	G	G	H	A	A	F	V	D	A	G	K	L	L	P	H	I	P	A
Query Conservation		.	.	.	.	.	.	.	.	.																						.	.	.																						.
Alig confidence		.	.	.	.	.	.	.	.	.																						.	.	.																						.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	R	R	A	K	A	K	S	N	I	T	T	N	A	Q	L	T	A	L	M	G	A	M	Y	L	A	A	L	G	P	E	G	L	R	E	V	A	L	K	S	V	E	M	A	H	K	L	H	A	L	L	L	E	V	P	G	V	R	P	F	T	P	K	P	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				G	G	G	S	S					S																																								T	T	S	T	T					S		S	S	B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
		374	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.			.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.
Predicted Secondary structure																																										.	.
Query SS confidence																																										.	.
Query Sequence		D	Q	F	P	A	Q	A	L	A	C	E	L	Y	K	V	A	G	I	R	A	V	E	I	G	S	F	L	L	G	R	D	P	K	T	G	K	Q	L	P	C	.	.	P	A	E	L	L	R	L	T	I	P	R	A	T	Y	T	Q	T	H	M	D	F	I	I	E	A	F	K	H	V
Query Conservation																																										.	.
Alig confidence		.	.	.	.	.	.	.	.																																	.	.									.
Template Conservation		.	.	.	.	.	.	.	.																																											.
Template Sequence		.	.	.	.	.	.	.	.	F	N	E	F	A	L	A	L	P	K	D	P	E	A	V	R	R	A	L	A	E	R	G	F	H	G	A	T	P	V	P	R	E	Y	G	E	N	L	A	L	F	A	.	A	T	E	L	H	E	E	E	D	L	L	A	L	R	E	A	L	K	E	V
Template Known Secondary structure		.	.	.	.	.	.	.	.		S							S	S												T	T									T	T	S		S	S						.			T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																																											.
Template SS confidence
										375	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.		.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions