Job Description P0A853 Confidence 99.87% Date Thu Jan 5 11:06:55 GMT 2012 Rank 149 Aligned Residues 331 % Identity 15% Template d1v2da_ SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like Resolution 1.90

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		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.				.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.			.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure																							.	.	.																										.	.
Query SS confidence																							.	.	.																										.	.
Query Sequence		I	D	L	L	T	D	S	G	T	G	A	V	T	Q	S	M	Q	A	A	M	M	.	.	.	R	G	D	E	A	Y	S	G	S	R	S	Y	Y	A	L	A	E	S	V	K	N	I	F	G	Y	.	.	Q	Y	T	I	P	T	H	Q	G	R	G	A	E	Q	I	Y	I	P	V	L	I	K	K	R	E	Q	E	K	G
Query Conservation																							.	.	.																										.	.
Alig confidence																							.	.	.																										.	.
Template Conservation
Template Sequence		V	N	L	G	Q	G	F	P	S	N	P	P	P	P	F	L	L	E	A	V	R	R	A	L	G	R	Q	D	Q	Y	A	P	P	A	G	L	P	A	L	R	E	A	L	A	E	E	F	A	V	E	P	E	S	V	V	V	T	S	G	A	T	E	A	L	Y	V	L	L	Q	S	L	V	G	P	G	D	E	V	V	V
Template Known Secondary structure								S		S	S														T	T	T	S		S				T	T														T	S		G	G	G					S	S															T	T
Template Predicted Secondary structure
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	R	S	K	M	V	A	F	S	N	Y	F	F	D	T	T	Q	G	H	S	Q	I	N	G	C	T	V	R	N	V	Y	I	K	E	A	F	D	T	G	V	R	Y	D	F	K	G	N	F	D	L	E	G	L	E	R	G	I	E	E	V	G	P	N	N	V	P	Y	I	V	A	T	I	T	S	N	S	A	G	G
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.																			.	.	.	.															.
Template Conservation								.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.																			.	.	.	.															.
Template Sequence		L	E	P	F	F	D	.	.	.	.	.	.	.	.	.	V	Y	L	P	D	A	F	L	A	G	A	K	A	R	L	V	R	L	D	L	.	.	.	.	.	.	.	T	P	E	G	F	R	L	D	L	S	A	L	E	K	A	L	T	P	.	.	.	.	R	T	R	A	L	L	L	N	T	P	M	N	P	T	.	G
Template Known Secondary structure				S			T	.	.	.	.	.	.	.	.	.	T								T	T											.	.	.	.	.	.	.		T	T											T	T			T	.	.	.	.	T								S	S		T	T	T	.
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.																			.	.	.	.															.
Template SS confidence
		108	.	110	.	.	.										.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.								.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.					.	.	.	.	.	.	.	.	160	.	.	.	.	.		.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	P	V	S	L	A	N	L	K	A	M	Y	S	I	A	K	K	Y	D	I	P	V	V	M	D	S	A	R	F	A	E	N	A	Y	F	I	K	Q	R	E	A	E	Y	K	D	W	T	I	E	Q	I	T	R	E	T	Y	K	Y	A	D	M	L	A	M	S	A	K	K	D	A	M	V	P	M	G	G	L	L	C	M
Query Conservation
Alig confidence																															.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.
Template Sequence		L	V	F	G	E	R	E	L	E	A	I	A	R	L	A	R	A	H	D	L	F	L	I	S	D	E	V	Y	D	.	.	.	.	.	.	.	.	.	.	E	L	Y	Y	G	E	R	P	R	R	L	R	E	F	A	P	E	R	T	F	T	V	G	S	A	G	K	R	L	E	A	T	G	Y	R	V	G	W	I	V	G
Template Known Secondary structure																			T	T								T	T	T	.	.	.	.	.	.	.	.	.	.	T		B	S	S	S										T	T	T											T	T		G	G	G
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.											.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.					.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.		.	.
Predicted Secondary structure																																																									.	.	.	.																			.
Query SS confidence																																																									.	.	.	.																			.
Query Sequence		K	D	D	S	F	F	D	V	Y	T	E	C	R	T	L	C	V	V	Q	E	G	F	P	T	Y	G	G	L	E	G	G	A	M	E	R	L	A	V	G	L	Y	D	G	M	N	L	D	W	L	A	Y	R	I	A	Q	.	.	.	.	V	Q	Y	L	V	D	G	L	E	E	I	G	V	V	C	Q	Q	A	.	G	G
Query Conservation																																																									.	.	.	.																			.
Alig confidence																.	.	.	.	.	.	.	.	.																																	.	.	.	.																			.
Template Conservation																.	.	.	.	.	.	.	.	.
Template Sequence		P	K	E	F	M	P	R	L	A	G	M	R	Q	W	.	.	.	.	.	.	.	.	.	T	S	F	S	A	P	T	P	L	Q	A	G	V	A	E	A	L	K	L	A	R	R	E	G	F	Y	E	A	L	R	E	G	Y	R	R	R	R	D	L	L	A	G	G	L	R	A	M	G	L	R	V	Y	V	P	E	G	T
Template Known Secondary structure			T	T	T											.	.	.	.	.	.	.	.	.		T	S	S																			T	T																							T	T							S	B	S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250										.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	A	A	F	V	D	A	G	K	L	L	P	H	I	P	A	D	Q	F	P	A	Q	A	L	A	C	E	L	Y	K	V	A	G	I	R	A	V	E	I	G	S	F	L	L	G	R	D	P	K	T	G	K	Q	L	P	C	P	A	E	L	L	R	L	T	I	P	R	A	T	Y	T	Q	T	H	M	D	F	I	I	E
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.												.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.												.	.	.
Template Sequence		Y	F	L	M	A	E	L	P	G	.	.	.	.	.	.	.	.	.	.	.	.	.	W	D	A	F	R	L	V	E	E	A	R	V	A	L	I	P	A	S	A	F	Y	L	E	.	.	.	.	.	.	.	.	.	D	P	P	K	D	L	F	R	F	A	F	.	.	.	C	K	T	E	E	E	L	H	L	A	L	E
Template Known Secondary structure		S							T	T	.	.	.	.	.	.	.	.	.	.	.	.	.										T							G	G	G	G		S	S	.	.	.	.	.	.	.	.	.	S			T	T							.	.	.		S
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.												.	.	.
Template SS confidence
		308	.	310	.	.	.	.	.	.														.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.										340	.	.	.	.	.	.	.	.	.	350				.	.	.	.	.	.	.	.	.	360	.	.
		438	.	440	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	K	H	V	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	L	G	R	V	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		363	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions