Job Description P0A853 Confidence 99.93% Date Thu Jan 5 11:06:55 GMT 2012 Rank 95 Aligned Residues 336 % Identity 15% Template d1pmma_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Pyridoxal-dependent decarboxylase Resolution 2.00

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		74	.	.	.	.	.	80	.	.	.	.	.	.					.	.	.	90	.	.	.	.	.								.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.				.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.										.	.	.	.	.	.	.																							.	.	.
Query SS confidence															.	.	.	.										.	.	.	.	.	.	.																							.	.	.
Query Sequence		Y	S	G	S	R	S	Y	Y	A	L	A	E	S	.	.	.	.	V	K	N	I	F	G	Y	Q	Y	.	.	.	.	.	.	.	T	I	P	T	H	Q	G	R	G	A	E	Q	I	Y	I	P	V	L	I	K	K	R	.	.	.	E	Q	E	K	G	L	D	R	S	K	M	V	A	F	S	N	Y	F	F	D	T	T
Query Conservation															.	.	.	.										.	.	.	.	.	.	.																							.	.	.
Alig confidence															.	.	.	.										.	.	.	.	.	.	.																							.	.	.
Template Conservation
Template Sequence		K	E	E	Y	P	Q	S	A	A	I	D	L	R	C	V	N	M	V	A	D	L	W	H	A	P	A	P	K	N	G	Q	A	V	G	T	N	T	I	G	S	S	E	A	C	M	L	G	G	M	A	M	K	W	R	W	R	K	R	M	E	A	A	G	K	P	T	D	K	P	N	L	V	C	G	P	V	Q	I	C	W
Template Known Secondary structure		T	T	T	S																		T	T					T	T	S			S					S	S																								T				S							S	S
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	G	H	S	Q	I	N	G	C	T	V	R	N	V	Y	I	K	E	A	F	D	T	G	V	R	Y	D	F	K	G	N	F	D	L	E	G	L	E	R	G	I	E	E	V	G	P	N	N	V	P	Y	I	V	A	T	I	T	S	N	S	A	G	G	Q	P	V	S	L	A	N	L	K	A	M	Y	S	I	A	K	K
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.																.	.	.	.																.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.																.	.	.	.																.	.	.	.
Template Sequence		H	K	F	A	R	Y	W	D	V	E	L	R	E	I	P	M	R	P	G	.	.	.	.	.	.	.	.	.	Q	L	F	M	D	P	K	R	M	I	E	A	C	D	E	.	.	.	.	N	T	I	G	V	V	P	T	F	G	V	T	Y	T	G	.	.	.	.	N	Y	E	F	P	Q	P	L	H	D	A	L	D	K
Template Known Secondary structure								T	T									B	T	T	.	.	.	.	.	.	.	.	.	B		S												T	.	.	.	.	T							B	B	S		T	T	T		.	.	.	.	B	B
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.																.	.	.	.																.	.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.										.	.	.	.	190	.	.	.	.	.	.	.	.	.	200					.	.	.	.	.	.	.	.	.	210	.	.	.	.	.					.	.	.	.	220	.	.	.	.	.	.	.	.	.
		220	.							.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.		.	.	280	.	.	.	.	.	.	.	.			.	290
Predicted Secondary structure				.	.	.	.	.	.																																																									.												.	.
Query SS confidence				.	.	.	.	.	.																																																									.												.	.
Query Sequence		Y	D	.	.	.	.	.	.	I	P	V	V	M	D	S	A	R	F	A	E	N	A	Y	F	I	K	Q	R	E	A	E	Y	K	D	W	T	I	E	Q	I	T	R	E	T	Y	K	Y	A	D	M	L	A	M	S	A	K	K	D	A	M	V	P	M	G	.	G	L	L	C	M	K	D	D	S	F	F	.	.	D	V
Query Conservation				.	.	.	.	.	.																																																									.												.	.
Alig confidence				.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.																		.												.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.
Template Sequence		F	Q	A	D	T	G	I	D	I	D	M	H	I	D	A	A	S	G	G	F	L	A	P	F	V	A	P	D	I	V	W	D	F	R	L	P	R	.	.	.	.	.	.	.	.	.	.	V	K	S	I	S	A	S	G	H	K	F	G	L	A	P	L	G	C	G	W	V	I	W	R	D	E	E	A	L	P	Q	E	L
Template Known Secondary structure																	T	T	G	G	G	T						T	T				S	T	T	S	T	T	.	.	.	.	.	.	.	.	.	.								T	T	T	T	T				S	S							S	S	G	G	G	S		G	G	G
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.											.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.				.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.
Query SS confidence																																							.	.	.
Query Sequence		Y	T	E	C	R	T	L	C	V	V	Q	E	G	F	P	T	Y	G	G	L	E	G	G	A	M	E	R	L	A	V	G	L	Y	D	G	M	N	.	.	.	L	D	W	L	A	Y	R	I	A	Q	V	Q	Y	L	V	D	G	L	E	E	I	G	V	V	C	Q	Q	A	G	G	H	A	A	F	V	D	A	G	K	L
Query Conservation																																							.	.	.
Alig confidence																																							.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	F	N	V	D	Y	L	G	G	Q	I	G	T	F	A	I	N	F	S	R	P	A	G	Q	V	I	A	Q	Y	Y	E	F	L	R	L	G	R	E	G	Y	T	K	V	Q	N	A	S	Y	Q	V	A	A	Y	L	A	D	E	I	A	K	L	G	P	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	E	F	I
Template Known Secondary structure								T	T								S			S		B	S																																						T	T	S		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.														.	.	.	.
		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.					.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.
Predicted Secondary structure																																																		.	.	.	.
Query SS confidence																																																		.	.	.	.
Query Sequence		L	P	H	I	P	A	D	Q	F	P	A	Q	A	L	A	C	E	L	Y	K	V	A	G	I	R	A	V	E	I	G	S	F	L	L	G	R	D	P	K	T	G	K	Q	L	P	C	P	A	.	.	.	.	E	L	L	R	L	T	I	P	R	A	T	Y	T	Q	T	H	M	D	F	I	I	E	A	F	K	H	V	K
Query Conservation																																																		.	.	.	.
Alig confidence																																																		.	.	.	.								.
Template Conservation																																																													.
Template Sequence		C	T	G	R	P	D	E	G	I	P	A	V	C	F	K	L	K	D	G	E	D	P	G	Y	T	L	Y	D	L	S	E	R	L	R	L	R	G	W	Q	V	P	A	F	T	L	G	G	E	A	T	D	I	V	V	M	R	I	M	C	.	R	R	G	F	E	M	D	F	A	E	L	L	L	E	D	Y	K	A	S	L
Template Known Secondary structure						T	T	T	B	S	S								T	T				S	S											T	T	T		B								T	T		T	T									.		T	T
Template Predicted Secondary structure																																																													.
Template SS confidence
		367	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.		.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.
		444	.	.	.	.	.	450
Predicted Secondary structure
Query SS confidence
Query Sequence		E	N	A	A	N	I	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	Y	L	S	D	H	P
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		446	.	.	.	450	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions