Job Description P0A853 Confidence 99.88% Date Thu Jan 5 11:06:55 GMT 2012 Rank 142 Aligned Residues 326 % Identity 15% Template d1m7ya_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.60

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		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90											.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	S	G	S	R	S	Y	Y	A	L	A	E	S	V	K	N	I	.	.	.	.	.	.	.	.	.	.	F	G	Y	Q	Y	T	I	P	T	H	Q	G	R	G	A	E	Q	I	Y	I	P	V	L	I	K	K	R	E	Q	E	K	G	L	D	R	S	K	M	V	A	F	S	N	Y	F	F	D	T	T	Q	G	H	S
Query Conservation																			.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.	.	.	.
Template Sequence		F	Q	D	Y	H	G	L	P	A	F	K	K	A	M	V	D	F	M	A	E	I	R	G	N	K	V	T	F	D	P	N	H	L	V	L	T	A	G	A	T	S	A	N	E	T	F	I	F	C	L	A	D	P	G	E	A	V	L	I	P	T	P	Y	.	.	.	.	.	.	.	.	Y	P	G	F	D	R	D	L	K
Template Known Secondary structure					T	T																	T	T	T	S	S				G	G	G																					T	T								S		.	.	.	.	.	.	.	.		T	T					T	T
Template Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.									.	.	.	.	.	150	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.			.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure																																									.	.
Query SS confidence																																									.	.
Query Sequence		Q	I	N	G	C	T	V	R	N	V	Y	I	K	E	A	F	D	T	G	V	R	Y	D	F	K	G	N	F	D	L	E	G	L	E	R	G	I	E	E	.	.	V	G	P	N	N	V	P	Y	I	V	A	T	I	T	S	N	S	A	G	G	Q	P	V	S	L	A	N	L	K	A	M	Y	S	I	A	K	K	Y	D
Query Conservation																																									.	.
Alig confidence																		.	.	.	.	.	.	.	.																.	.																			.
Template Conservation																		.	.	.	.	.	.	.	.																																				.
Template Sequence		W	R	T	G	V	E	I	V	P	I	H	C	T	S	S	N	.	.	.	.	.	.	.	.	G	F	Q	I	T	E	T	A	L	E	E	A	Y	Q	E	A	E	K	R	N	L	R	V	K	G	V	L	V	T	N	P	S	N	P	L	.	G	T	T	M	T	R	N	E	L	Y	L	L	L	S	F	V	E	D	K	G
Template Known Secondary structure		T	T	T											G	G	G	.	.	.	.	.	.	.	.	T	S																	T	T										S	S		T	T	T	.																				T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.																																				.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.									170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260								.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.			.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.																	.	.
Query SS confidence																																									.	.	.	.	.	.	.																	.	.
Query Sequence		I	P	V	V	M	D	S	A	R	F	A	E	N	A	Y	F	I	K	Q	R	E	A	E	Y	K	D	W	T	I	E	Q	I	T	R	E	T	Y	K	Y	.	.	.	.	.	.	.	A	D	M	L	A	M	S	A	K	K	D	A	M	V	P	M	.	.	G	G	L	L	C	M	K	D	D	S	F	F	D	V	Y	T
Query Conservation																																									.	.	.	.	.	.	.																	.	.
Alig confidence													.	.	.	.	.	.	.																						.	.	.	.	.	.	.																	.	.
Template Conservation													.	.	.	.	.	.	.
Template Sequence		I	H	L	I	S	D	E	I	Y	S	G	.	.	.	.	.	.	.	T	A	F	S	S	P	S	F	I	S	V	M	E	V	L	K	D	R	N	C	D	E	N	S	E	V	W	Q	R	V	H	V	V	Y	S	L	S	K	D	L	G	L	P	G	F	R	V	G	A	I	Y	S	N	D	D	M	V	V	A	A	A	T
Template Known Secondary structure									T	T	G	G	.	.	.	.	.	.	.	G			S	S	S									T	T	T	T	T		S	S	S	S	S	G	G	G	G							S	S	S	S	S			G	G	G								S
Template Predicted Secondary structure													.	.	.	.	.	.	.
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.								.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.			.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.		.	.	.	.	360	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.																													.
Query SS confidence																																					.	.																													.
Query Sequence		E	C	R	T	L	C	V	V	Q	E	G	F	P	T	Y	G	G	L	E	G	G	A	M	E	R	L	A	V	G	L	Y	D	G	M	N	.	.	L	D	W	L	A	Y	R	I	A	Q	V	Q	Y	L	V	D	G	L	E	E	I	G	V	V	C	Q	Q	A	.	G	G	H	A	A	F	V	D	A	G	K	L	L	P
Query Conservation																																					.	.																													.
Alig confidence								.	.	.	.	.	.	.																							.	.																													.
Template Conservation								.	.	.	.	.	.	.
Template Sequence		K	M	S	S	F	G	.	.	.	.	.	.	.	L	V	S	S	Q	T	Q	H	L	L	S	A	M	L	S	D	K	K	L	T	K	N	Y	I	A	E	N	H	K	R	L	K	Q	R	Q	K	K	L	V	S	G	L	Q	K	S	G	I	S	C	L	N	G	N	A	G	L	F	C	W	V	D	M	R	H	L	L	R
Template Known Secondary structure				G	G	G	S	.	.	.	.	.	.	.																																												T	T	T								S	S	S							G	G	G	S	S
Template Predicted Secondary structure								.	.	.	.	.	.	.
Template SS confidence
		298	.	300	.	.	.								.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	I	P	A	D	Q	F	P	A	Q	A	L	A	C	E	L	Y	K	V	A	G	I	R	A	V	E	I	G	S	F	L	L	G	R	D	P	K	T	G	K	Q	L	P	C	P	A	E	L	L	R	L	T	I	P	R	A	T	Y	T	Q	T	H	M	D	F	I	I	E	A	F	K	H	V	K	E	N
Query Conservation
Alig confidence			.	.																												.	.	.	.	.	.	.	.	.	.	.												.	.
Template Conservation			.	.																												.	.	.	.	.	.	.	.	.	.	.												.	.
Template Sequence		S	.	.	N	T	F	E	A	E	M	E	L	W	K	K	I	V	Y	E	V	H	L	N	I	S	P	G	S	S	C	.	.	.	.	.	.	.	.	.	.	.	H	C	T	E	P	G	W	F	R	V	C	.	.	F	A	N	L	P	E	R	T	L	D	L	A	M	Q	R	L	K	A	F	V	G	E
Template Known Secondary structure		S	.	.	S	S														T	S							G	G	G	G	.	.	.	.	.	.	.	.	.	.	.	T		S	S	T	T						.	.		S	S	S
Template Predicted Secondary structure			.	.																												.	.	.	.	.	.	.	.	.	.	.												.	.
Template SS confidence
		371			.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.												.	400	.	.	.	.	.	.	.	.	.			410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions