Job Description P0A853 Confidence 99.87% Date Thu Jan 5 11:06:55 GMT 2012 Rank 156 Aligned Residues 337 % Identity 13% Template d1lc5a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like Resolution 1.46

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.			.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.			.	.	.	.	.	100	.	.	.
Predicted Secondary structure																																											.	.																											.	.
Query SS confidence																																											.	.																											.	.
Query Sequence		E	E	A	I	I	K	S	G	M	N	P	F	L	L	D	S	E	D	V	F	I	D	L	L	T	D	S	G	T	G	A	V	T	Q	S	M	Q	A	A	M	M	.	.	R	G	D	E	A	Y	S	G	S	R	S	Y	Y	A	L	A	E	S	V	K	N	I	F	G	Y	Q	.	.	Y	T	I	P	T	H	Q	G	R
Query Conservation																																											.	.																											.	.
Alig confidence																.	.	.	.	.	.																						.	.																											.	.
Template Conservation																.	.	.	.	.	.
Template Sequence		R	E	P	A	T	V	L	G	I	S	P	D	Q	L	.	.	.	.	.	.	L	D	F	S	A	N	I	N	P	L	G	M	P	V	S	V	K	R	A	L	I	D	N	L	D	C	I	E	R	Y	P	D	A	D	Y	F	H	L	H	Q	A	L	A	R	H	H	Q	V	P	A	S	W	I	L	A	G	N	G	E	T
Template Known Secondary structure									T	S		G	G	G	S	.	.	.	.	.	.				S	S				T	T													T	G	G	G	G	G	S				T	T													T	S		G	G	G					S	S
Template Predicted Secondary structure																.	.	.	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.							.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	E	Q	I	Y	I	P	V	L	I	K	K	R	E	Q	E	K	G	L	D	R	S	K	M	V	A	F	S	N	Y	F	F	D	T	T	Q	G	H	S	Q	I	N	G	C	T	V	R	N	V	Y	I	K	E	A	F	D	T	G	V	R	Y	D	F	K	G	N	F	D	L	E	G	L	E	R	G	I	E	E	V
Query Conservation
Alig confidence												.	.											.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.																.
Template Conservation												.	.											.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.																.
Template Sequence		E	S	I	F	T	V	A	S	G	L	.	.	K	P	R	R	A	M	I	V	T	P	.	.	.	.	.	.	.	.	.	G	F	A	E	Y	G	R	A	L	A	Q	S	G	C	E	I	R	R	W	S	L	R	E	A	.	.	.	.	.	.	.	.	.	D	G	W	Q	L	T	D	A	I	L	E	A	L	T	P	.
Template Known Secondary structure												.	.			S							S	.	.	.	.	.	.	.	.	.			T									T	T										G	G	.	.	.	.	.	.	.	.	.	G	T	T				T	T							T	.
Template Predicted Secondary structure												.	.											.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.																.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.			.	.	.	100	.	.	.	.	.	.										.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130										.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	P	N	N	V	P	Y	I	V	A	T	I	T	S	N	S	A	G	G	Q	P	V	S	L	A	N	L	K	A	M	Y	S	I	A	K	K	Y	D	I	P	V	V	M	D	S	A	R	F	A	E	N	A	Y	F	I	K	Q	R	E	A	E	Y	K	D	W	T	I	E	Q	I	T	R	E	T	Y	K	Y	A	D	M
Query Conservation
Alig confidence		.	.	.															.																															.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.															.																															.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	D	L	D	C	L	F	L	C	T	P	N	N	P	T	.	G	L	L	P	E	R	P	L	L	Q	A	I	A	D	R	C	K	S	L	N	I	N	L	I	L	D	E	A	F	I	.	.	.	.	.	.	.	.	.	.	D	F	I	P	H	E	T	G	F	I	P	A	L	K	D	N	P	H	I	W	V	L
Template Known Secondary structure		.	.	.	T								S	S		T	T	T	.																				T								T	T	G	.	.	.	.	.	.	.	.	.	.	G	G	S	T	T				S	G	G	G		T	T		T	T
Template Predicted Secondary structure		.	.	.															.																															.	.	.	.	.	.	.	.	.	.
Template SS confidence
					146	.	.	.	150	.	.	.	.	.	.	.	.	.		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.											190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	M	S	A	K	K	D	A	M	V	P	M	G	G	L	L	C	M	K	D	D	S	F	F	D	V	Y	T	E	C	R	T	L	C	V	V	Q	E	G	F	P	T	Y	G	G	L	E	G	G	A	M	E	R	L	A	V	G	L	Y	D	G	M	N	L	D	W	L	A	Y	R	I	A	Q	V	Q	Y	L	V	D
Query Conservation
Alig confidence																																			.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.
Template Sequence		R	S	L	T	K	F	Y	A	I	P	G	L	R	L	G	Y	L	V	N	S	D	D	A	A	M	A	R	M	R	R	Q	Q	M	.	.	.	.	.	.	.	.	.	P	W	S	V	N	A	L	A	A	L	A	G	E	V	A	L	Q	D	S	A	W	Q	Q	A	T	W	H	W	L	R	E	E	G	A	R	F	Y	Q
Template Known Secondary structure				S	T	T	T	T	T		T	T	T																				S		.	.	.	.	.	.	.	.	.	T	T		S											G	G	G
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.										.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
		344	.	.	.	.	.	350		.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.			.	.	.	.	.	420
Predicted Secondary structure									.																																																																	.	.
Query SS confidence									.																																																																	.	.
Query Sequence		G	L	E	E	I	G	V	.	V	C	Q	Q	A	G	G	H	A	A	F	V	D	A	G	K	L	L	P	H	I	P	A	D	Q	F	P	A	Q	A	L	A	C	E	L	Y	K	V	A	G	I	R	A	V	E	I	G	S	F	L	L	G	R	D	P	K	T	G	K	Q	L	P	C	P	.	.	A	E	L	L	R	L
Query Conservation									.																																																																	.	.
Alig confidence									.															.	.	.	.	.	.	.	.	.	.															.						.	.	.	.	.	.	.	.	.	.	.	.	.								.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.															.						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	L	C	Q	L	P	L	L	T	V	Y	P	G	R	A	N	Y	L	L	L	R	C	.	.	.	.	.	.	.	.	.	.	E	R	E	D	I	D	L	Q	R	R	L	L	T	Q	.	R	I	L	I	R	.	.	.	.	.	.	.	.	.	.	.	.	.	S	C	A	N	Y	P	G	L	D	S	R	Y	Y	R	V
Template Known Secondary structure					T	S	T	T							S	S	S							.	.	.	.	.	.	.	.	.	.	S		T	T									T	T	.	T					.	.	.	.	.	.	.	.	.	.	.	.	.			T	T	S	T	T			T	T
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.															.						.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.											.	.	.	.	.	310	.	.	.	.	.	.	.	.		.	320	.	.	.														.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
		421	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	I	P	R	A	T	Y	T	Q	T	H	M	D	F	I	I	E	A	F	K	H	V
Query Conservation
Alig confidence					.	.	.	.
Template Conservation					.	.	.	.
Template Sequence		A	I	R	.	.	.	.	S	A	A	Q	N	E	R	L	L	A	A	L	R	N	V
Template Known Secondary structure					.	.	.	.
Template Predicted Secondary structure					.	.	.	.
Template SS confidence
		339	340	.					.	.	.	.	.	.	.	.	350	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions