Job Description P0A853 Confidence 99.98% Date Thu Jan 5 11:06:55 GMT 2012 Rank 37 Aligned Residues 341 % Identity 17% Template d1kl1a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.93

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		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.												.	70	.	.	.	.	.	.	.	.	.	80	.	.					.	.	.	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.															.	.	.	.															.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.															.	.	.	.															.
Query Sequence		F	I	D	L	L	T	D	S	G	T	G	A	V	T	Q	S	M	Q	A	A	M	M	.	.	.	.	.	.	.	.	.	.	.	R	G	D	E	A	Y	S	G	S	R	S	Y	Y	A	.	.	.	.	L	A	E	S	V	K	N	I	F	G	Y	Q	Y	T	.	I	P	T	H	Q	G	R	G	A	E	Q	I	Y	I
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.															.	.	.	.															.
Alig confidence						.	.																	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.															.
Template Conservation						.	.
Template Sequence		K	I	E	L	.	.	I	A	S	E	N	F	V	S	R	A	V	M	E	A	Q	G	S	V	L	T	N	K	Y	A	E	G	Y	P	G	R	R	Y	Y	G	G	C	E	Y	V	D	I	V	E	E	L	A	R	E	R	A	K	Q	L	F	G	A	E	H	A	N	V	Q	P	H	S	G	A	Q	A	N	M	A	V	Y
Template Known Secondary structure		S				.	.		T	T													T	S	G	G	G	G							T	T			S	S	S																							S							S	S
Template Predicted Secondary structure						.	.
Template SS confidence
		25	.	.	.			.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	L	I	K	K	R	E	Q	E	K	G	L	D	R	S	K	M	V	A	F	S	N	Y	F	F	D	T	T	Q	G	H	S	Q	I	N	G	C	T	V	R	N	V	Y	I	K	E	A	F	D	T	G	V	R	Y	D	F	K	G	N	F	D	L	E	G	L	E	R	G	I	E	E	V	G	P	N	N	V	P	Y
Query Conservation
Alig confidence																				.	.	.	.	.	.																								.	.	.	.	.	.	.																			.	.	.	.
Template Conservation																				.	.	.	.	.	.																								.	.	.	.	.	.	.																			.	.	.	.
Template Sequence		F	T	V	L	E	H	G	D	T	V	L	G	M	N	L	S	H	G	.	.	.	.	.	.	G	H	L	T	H	G	S	P	V	N	F	S	G	V	Q	Y	N	F	V	A	Y	G	V	.	.	.	.	.	.	.	D	P	E	T	H	V	I	D	Y	D	D	V	R	E	K	A	R	L	.	.	.	.	H	R	P	K
Template Known Secondary structure							T	T								G	G	G	T	.	.	.	.	.	.			G	G	G	T		T	T	S						S							B	.	.	.	.	.	.	.		T	T	T		S	B												.	.	.	.				S
Template Predicted Secondary structure																				.	.	.	.	.	.																								.	.	.	.	.	.	.																			.	.	.	.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120							.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.								.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.					.	.	.	.
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	A	T	I	T	S	N	S	A	G	G	Q	P	V	S	L	A	N	L	K	A	M	Y	S	I	A	K	K	Y	D	I	P	V	V	M	D	S	A	R	F	A	E	N	A	Y	F	I	K	Q	R	E	A	E	Y	K	D	W	T	I	E	Q	I	T	R	E	T	Y	K	Y	A	D	M	L	A	M	S	A	K	K
Query Conservation
Alig confidence															.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	I	V	A	A	A	S	A	Y	P	R	I	I	.	.	.	.	.	D	F	A	K	F	R	E	I	A	D	E	V	G	A	Y	L	M	V	D	M	A	H	I	A	G	L	V	A	A	G	L	H	P	N	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	P	Y	A	H	F	V	T	T	T	T	H	K
Template Known Secondary structure								S	S			S			.	.	.	.	.													T								T	T	T						T	T	S	S			S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T		S						S	S	S
Template Predicted Secondary structure															.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.						.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.															.	.	.	.	.	.	220	.	.	.	.	.	.
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.				.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.
Query SS confidence																																																											.	.	.
Query Sequence		D	A	M	V	P	M	G	G	L	L	C	M	K	D	D	S	F	F	D	V	Y	T	E	C	R	T	L	C	V	V	Q	E	G	F	P	T	Y	G	G	L	E	G	G	A	M	E	R	L	A	V	G	L	Y	D	G	M	N	.	.	.	L	D	W	L	A	Y	R	I	A	Q	V	Q	Y	L	V	D	G	L	E	E
Query Conservation																																																											.	.	.
Alig confidence																													.	.	.	.	.	.	.	.																							.	.	.
Template Conservation																													.	.	.	.	.	.	.	.
Template Sequence		T	L	R	G	P	R	G	G	M	I	L	C	Q	E	Q	F	A	K	Q	I	D	K	A	I	F	P	G	.	.	.	.	.	.	.	.	I	Q	G	G	P	L	M	H	V	I	A	A	K	A	V	A	F	G	E	A	L	Q	D	D	F	K	A	Y	A	K	R	V	V	D	N	A	K	R	L	A	S	A	L	Q	N
Template Known Secondary structure		T	T				S																			T	T	T	.	.	.	.	.	.	.	.	T		S	S																		S
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.									.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
		348	.	350	.	.	.			.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
Predicted Secondary structure								.	.																																																																							.	.
Query SS confidence								.	.																																																																							.	.
Query Sequence		I	G	V	V	C	Q	.	.	Q	A	G	G	H	A	A	F	V	D	A	G	K	L	L	P	H	I	P	A	D	Q	F	P	A	Q	A	L	A	C	E	L	Y	K	V	A	G	I	R	A	V	E	I	G	S	F	L	L	G	R	D	P	K	T	G	K	Q	L	P	C	P	A	E	L	L	R	L	T	I	P	.	.
Query Conservation								.	.																																																																							.	.
Alig confidence								.	.											.	.	.	.	.	.	.																	.																						.	.	.	.	.	.	.									.	.
Template Conservation																				.	.	.	.	.	.	.																	.																						.	.	.	.	.	.	.
Template Sequence		E	G	F	T	L	V	S	G	G	T	D	N	H	L	L	L	V	D	.	.	.	.	.	.	.	L	R	P	Q	Q	L	T	G	K	T	A	E	K	V	L	D	.	E	V	G	I	T	V	N	K	N	T	I	P	Y	D	P	E	S	P	F	V	T	.	.	.	.	.	.	.	S	G	I	R	I	G	T	A	A	V
Template Known Secondary structure		T	T				G	G	G	S		S	S	S						.	.	.	.	.	.	.		G	G	G	T												.			T									T	T		S	S		T	T	T		.	.	.	.	.	.	.	S
Template Predicted Secondary structure																				.	.	.	.	.	.	.																	.																						.	.	.	.	.	.	.
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.								.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.		.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.								.	.	.	.	.	.	360	.	.	.
			424	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	R	A	T	Y	T	Q	T	H	M	D	F	I	I	E	A	F	K	H	V	K	E	N	A	A	N
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		T	T	R	G	F	G	L	E	E	M	D	E	I	A	A	I	I	G	L	V	L	K	N	V	G	S
Template Known Secondary structure				T	T																		T		T	T
Template Predicted Secondary structure
Template SS confidence
		364	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions