Job Description P0A853 Confidence 99.94% Date Thu Jan 5 11:06:55 GMT 2012 Rank 83 Aligned Residues 328 % Identity 12% Template d1js3a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Pyridoxal-dependent decarboxylase Resolution 2.25

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		73	.	.	.	.	.	.	80	.	.	.	.					.	.	.	.	.	90	.	.	.	.	.												.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.												.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.												.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	Y	S	G	S	R	S	Y	Y	A	L	A	.	.	.	.	E	S	V	K	N	I	F	G	Y	Q	Y	.	.	.	.	.	.	.	.	.	.	.	T	I	P	T	H	Q	G	R	G	A	E	Q	I	Y	I	P	V	L	I	K	K	R	E	Q	E	K	G	L	D	R	S	K	.	.	.	.	.	.	.	.	.	.
Query Conservation														.	.	.	.												.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.												.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	W	A	A	S	P	A	C	T	E	L	E	T	V	M	M	D	W	L	G	K	M	L	Q	L	P	E	A	F	L	A	G	E	A	G	E	G	G	G	V	I	Q	G	S	A	S	E	A	T	L	V	A	L	L	A	A	R	T	K	V	V	R	R	L	Q	A	A	S	P	G	L	T	Q	G	A	V	L	E	K	L
Template Known Secondary structure		S	G	G	G																			T	T			G	G	G			T	T	T		S							S																									S	T	T
Template Predicted Secondary structure
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.			.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure																																																												.	.
Query SS confidence																																																												.	.
Query Sequence		M	V	A	F	S	N	Y	F	F	D	T	T	Q	G	H	S	Q	I	N	G	C	T	V	R	N	V	Y	I	K	E	A	F	D	T	G	V	R	Y	D	F	K	G	N	F	D	L	E	G	L	E	R	G	I	E	E	V	G	P	.	.	N	N	V	P	Y	I	V	A	T	I	T	S	N	S	A	G	G	Q	P	V
Query Conservation																																																												.	.
Alig confidence																																.	.	.	.	.	.	.	.	.	.																			.	.																	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.																																					.	.	.	.
Template Sequence		V	A	Y	A	S	D	Q	A	H	S	S	V	E	R	A	G	L	I	G	G	V	K	L	K	A	I	P	S	D	G	.	.	.	.	.	.	.	.	.	.	K	F	A	M	R	A	S	A	L	Q	E	A	L	E	R	D	K	A	A	G	L	I	P	F	F	V	V	A	T	L	G	T	T	S	C	C	.	.	.	.
Template Known Secondary structure							T	T													T										T	.	.	.	.	.	.	.	.	.	.	T	S																	T	T										B	S		T	T	T		.	.	.	.
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.																																					.	.	.	.
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.											.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.			.	.	280	.	.	.
Predicted Secondary structure																																																																										.	.
Query SS confidence																																																																										.	.
Query Sequence		S	L	A	N	L	K	A	M	Y	S	I	A	K	K	Y	D	I	P	V	V	M	D	S	A	R	F	A	E	N	A	Y	F	I	K	Q	R	E	A	E	Y	K	D	W	T	I	E	Q	I	T	R	E	T	Y	K	Y	A	D	M	L	A	M	S	A	K	K	D	A	M	V	P	M	G	.	.	G	L	L	C	M	K
Query Conservation																																																																										.	.
Alig confidence																																											.	.	.	.	.	.	.	.	.	.	.																					.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	F	D	N	L	L	E	V	G	P	I	C	H	E	E	D	I	W	L	H	V	D	A	A	Y	A	G	S	A	F	I	C	P	E	F	R	H	L	L	N	G	.	.	.	.	.	.	.	.	.	.	.	V	E	F	A	D	S	F	N	F	N	P	H	K	W	L	L	V	N	F	D	C	S	A	M	W	V	K	R
Template Known Secondary structure			B													T	T								T	T	G	G	G	G	G	G	S	T	T	T	G	G	G	G	T	T	.	.	.	.	.	.	.	.	.	.	.	G	G	G		S										S	S			S	S							S
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290												.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.		.	350	.	.	.		.	.	.	.	.	.	360	.
Predicted Secondary structure																																																																			.						.
Query SS confidence																																																																			.						.
Query Sequence		D	D	S	F	F	D	V	Y	T	E	C	R	T	L	C	V	V	Q	E	G	F	P	T	Y	G	G	L	E	G	G	A	M	E	R	L	A	V	G	L	Y	D	G	M	N	L	D	W	L	A	Y	R	I	A	Q	V	Q	Y	L	V	D	G	L	E	E	I	.	G	V	V	C	Q	.	Q	A	G	G	H	A	A	F
Query Conservation																																																																			.						.
Alig confidence																																																																			.						.
Template Conservation
Template Sequence		R	T	D	L	T	G	A	F	K	S	G	L	I	T	D	Y	R	H	W	Q	L	P	L	G	R	R	F	R	S	L	K	M	W	F	V	F	R	M	Y	G	V	K	G	L	Q	A	Y	I	R	K	H	V	Q	L	S	H	E	F	E	A	F	V	L	Q	D	P	R	F	E	V	C	A	E	V	T	L	G	L	V	C
Template Known Secondary structure							G	G	G				S				G	G	G	S	S	S		S					T																																						T	T					S				S	S
Template Predicted Secondary structure
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	A	G	K	L	L	P	H	I	P	A	D	Q	F	P	A	Q	A	L	A	C	E	L	Y	K	V	A	G	I	R	A	V	E	I	G	S	F	L	L	G	R	D	P	K	T	G	K	Q	L	P	C	P	A	E	L	L	R	L	T	I	P	R	A	T	Y	T	Q	T	H	M	D	F	I	I	E	A	F	K	H
Query Conservation
Alig confidence				.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	R	.	.	.	.	.	.	.	L	K	G	S	D	G	L	N	E	A	L	L	E	R	I	N	S	A	R	K	I	H	L	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	C	R	L	R	G	Q	F	V	L	R	F	A	I	C	S	R	K	V	E	S	G	H	V	R	L	A	W	E	H	I	R	G
Template Known Secondary structure				.	.	.	.	.	.	.		S	S																T	S		B			.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T											T	T
Template Predicted Secondary structure				.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		411	.								.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.															.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.
		442	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	E	N	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	A	E	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		470	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions