Job Description P0A853 Confidence 99.89% Date Thu Jan 5 11:06:55 GMT 2012 Rank 131 Aligned Residues 330 % Identity 15% Template d1h0ca_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 2.5

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		55	.	.	.	.	60	.	.	.	.	.	.	.	.				.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.				.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.																											.	.	.
Query SS confidence																.	.	.																											.	.	.
Query Sequence		G	T	G	A	V	T	Q	S	M	Q	A	A	M	M	.	.	.	R	G	D	E	A	Y	S	G	S	R	S	Y	Y	A	L	A	E	S	V	K	N	I	F	G	Y	Q	.	.	.	Y	T	I	P	T	H	Q	G	R	G	A	E	Q	I	Y	I	P	V	L	I	K	K	R	E	Q	E	K	G	L	D	R	S	K	M
Query Conservation																.	.	.																											.	.	.
Alig confidence																.	.	.																											.	.	.																																		.
Template Conservation																																																																																	.
Template Sequence		G	P	S	N	L	P	P	R	I	M	A	A	G	G	L	Q	M	I	G	S	M	S	K	D	M	Y	Q	I	M	D	E	I	K	E	G	I	Q	Y	V	F	Q	T	R	N	P	L	T	L	V	I	S	G	S	G	H	C	A	L	E	A	A	L	V	N	V	L	E	P	G	D	S	F	L	V	G	A	N	G	I	.
Template Known Secondary structure		S													T						T	T	S																			T				S						S	S																S	S							B	S	S		.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	F	S	N	Y	F	F	D	T	T	Q	G	H	S	Q	I	N	G	C	T	V	R	N	V	Y	I	K	E	A	F	D	T	G	V	R	Y	D	F	K	G	N	F	D	L	E	G	L	E	R	G	I	E	E	V	G	P	N	N	V	P	Y	I	V	A	T	I	T	S	N	S	A	G	G	Q	P	V	S	L	A
Query Conservation
Alig confidence		.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.																					.	.
Template Conservation		.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.																					.	.
Template Sequence		.	.	.	.	.	.	W	G	Q	R	A	V	D	I	G	E	R	I	G	V	H	P	M	T	K	D	P	G	.	.	.	.	.	.	.	.	.	.	.	.	G	H	Y	T	L	Q	E	V	E	E	G	L	A	Q	.	.	.	.	H	K	P	V	L	L	F	L	T	H	G	E	S	S	T	G	V	L	Q	P	.	.
Template Known Secondary structure		.	.	.	.	.	.															B			B			T	T	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.				S						S			T	T	T	T					.	.
Template Predicted Secondary structure		.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.																					.	.
Template SS confidence
								108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.													130	.	.	.	.	.	.	.	.	.	140	.	.	.					.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.		.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure																																																																							.
Query SS confidence																																																																							.
Query Sequence		N	L	K	A	M	Y	S	I	A	K	K	Y	D	I	P	V	V	M	D	S	A	R	F	A	E	N	A	Y	F	I	K	Q	R	E	A	E	Y	K	D	W	T	I	E	Q	I	T	R	E	T	Y	K	Y	A	D	M	L	A	M	S	A	K	K	D	A	M	V	P	M	G	.	G	L	L	C	M	K	D	D	S	F
Query Conservation																																																																							.
Alig confidence		.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation		.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	L	D	G	F	G	E	L	C	H	R	Y	K	C	L	L	L	V	D	S	V	A	S	L	G	G	T	P	L	Y	M	D	R	Q	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	D	I	L	Y	S	G	S	Q	K	A	L	N	A	P	P	G	T	S	L	I	S	F	S	D	K	A	K
Template Known Secondary structure		.		T	T							T	T	T								T	T	T	T	T	T	S				T	T	T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S						S	S	S	T	T				T	T
Template Predicted Secondary structure		.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.																		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
																			288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	D	V	Y	T	E	C	R	T	L	C	V	V	Q	E	G	F	P	T	Y	G	G	L	E	G	G	A	M	E	R	L	A	V	G	L	Y	D	G	M	N	L	D	W	L	A	Y	R	I	A	Q	V	Q	Y	L	V	D	G	L	E	E	I	G	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	K	M	Y	S	R	K	T	K	P	F	S	F	Y	L	D	I	K	W	L	A	N	F	W	G	C	D	D	Q	P	R	M	Y	H	H	T	I	P	V	I	S	L	Y	S	L	R	E	S	L	A	L	I	A	E	Q	G	L	E	N	S	W	R	Q	H	R	E	A	A	A	Y	L	H	G	R	L	Q	A	L	G	L
Template Known Secondary structure					T	T		S	S			S		S	T	T									T	T		S	S	S						S																																												T
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		351	.	.	.	.	.						.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.
Query SS confidence								.	.	.	.	.
Query Sequence		V	C	Q	Q	A	G	.	.	.	.	.	G	H	A	A	F	V	D	A	G	K	L	L	P	H	I	P	A	D	Q	F	P	A	Q	A	L	A	C	E	L	Y	K	V	A	G	I	R	A	V	E	I	G	S	F	L	L	G	R	D	P	K	T	G	K	Q	L	P	C	P	A	E	L	L	R	L	T	I	P	R	A
Query Conservation								.	.	.	.	.
Alig confidence								.	.	.	.	.											.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	L	F	V	K	D	P	A	L	R	L	P	T	V	T	T	V	A	V	P	A	.	.	.	.	.	.	.	.	G	Y	D	W	R	D	I	V	S	Y	V	I	D	H	F	D	I	E	I	M	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	L	G	P	S	T	G	K	V	L	R	I	G	L	L	G	C
Template Known Secondary structure			B	S	S		S	G	G	G	B		T	T								T	.	.	.	.	.	.	.	.	T																				.	.	.	.	.	.	.	.	.	.	.	.	.				G	G	G	T	T	T								G	G
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.									.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.														.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
		426	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Y	T	Q	T	H	M	D	F	I	I	E	A	F	K	H	V	K	E	N	A	A	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	A	T	R	E	N	V	D	R	V	T	E	A	L	R	A	A	L	Q	H	C	P	K
Template Known Secondary structure		G		S																		S
Template Predicted Secondary structure
Template SS confidence
		367	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions