Job Description P0A853 Confidence 99.81% Date Thu Jan 5 11:06:55 GMT 2012 Rank 202 Aligned Residues 345 % Identity 12% Template d1gdea_ SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like Resolution 1.80

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		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.					.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.										.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure																							.	.	.	.																									.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.																									.	.	.	.	.	.	.	.	.
Query Sequence		I	D	L	L	T	D	S	G	T	G	A	V	T	Q	S	M	Q	A	A	M	M	.	.	.	.	R	G	D	E	A	Y	S	G	S	R	S	Y	Y	A	L	A	E	S	V	K	N	I	F	G	.	.	.	.	.	.	.	.	.	Y	Q	Y	T	I	P	T	H	Q	G	R	G	A	E	Q	I	Y	I	P	V	L	I
Query Conservation																							.	.	.	.																									.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.																									.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	S	L	G	I	G	E	P	D	F	D	T	P	Q	H	I	K	E	Y	A	K	E	A	L	D	K	G	L	T	H	Y	G	P	N	I	G	L	L	E	L	R	E	A	I	A	E	K	L	K	K	Q	N	G	I	E	A	D	P	K	T	E	I	M	V	L	L	G	A	N	Q	A	F	L	M	G	L	S	A	F	L
Template Known Secondary structure								S			S																T	T			S				T	T																							T	T	T	S					S	S	T	T								T	T	T
Template Predicted Secondary structure
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	R	E	Q	E	K	G	L	D	R	S	K	M	V	A	F	S	N	Y	F	F	D	T	T	Q	G	H	S	Q	I	N	G	C	T	V	R	N	V	Y	I	K	E	A	F	D	T	G	V	R	Y	D	F	K	G	N	F	D	L	E	G	L	E	R	G	I	E	E	V	G	P	N	N	V	P	Y	I	V	A	T
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.																.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.																.	.	.	.
Template Sequence		K	D	G	E	E	V	L	I	P	T	P	.	.	.	.	.	.	.	.	.	A	F	V	S	Y	A	P	A	V	I	L	A	G	G	K	P	V	E	V	P	T	Y	E	E	D	.	.	.	.	.	.	.	.	E	F	R	L	N	V	D	E	L	K	K	Y	V	T	D	.	.	.	.	K	T	R	A	L	I	I	N
Template Known Secondary structure			T	T								S	.	.	.	.	.	.	.	.	.			T	T									T										G	G	G	.	.	.	.	.	.	.	.	T	T													T	.	.	.	.	T
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.																.	.	.	.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.										120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.									.	.	.	.	.	150	.	.	.	.	.	.	.	.	.					160	.	.	.	.	.	.	.
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	S	N	S	A	G	G	Q	P	V	S	L	A	N	L	K	A	M	Y	S	I	A	K	K	Y	D	I	P	V	V	M	D	S	A	R	F	A	E	N	A	Y	F	I	K	Q	R	E	A	E	Y	K	D	W	T	I	E	Q	I	T	R	E	T	Y	K	Y	A	D	M	L	A	M	S	A	K	K	D	A	M	V
Query Conservation
Alig confidence								.																																.	.	.	.	.	.	.
Template Conservation								.																																.	.	.	.	.	.	.
Template Sequence		S	P	C	N	P	T	.	G	A	V	L	T	K	K	D	L	E	E	I	A	D	F	V	V	E	H	D	L	I	V	I	S	D	E	V	Y	E	H	.	.	.	.	.	.	.	F	I	Y	D	D	A	R	H	Y	S	I	A	S	L	D	G	M	F	E	R	T	I	T	V	N	G	F	S	K	T	F	A	M	T	G
Template Known Secondary structure		S	S		T	T	T	.																			T	T								T	T	T	T	.	.	.	.	.	.	.		B		T	T						G	G	G	S	T	T		G	G	G							S	T	T	T	T	T		G	G
Template Predicted Secondary structure								.																																.	.	.	.	.	.	.
Template SS confidence
		168	.	170	.	.	.		.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.								.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.					.	.	.	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure																																																																.	.	.	.
Query SS confidence																																																																.	.	.	.
Query Sequence		P	M	G	G	L	L	C	M	K	D	D	S	F	F	D	V	Y	T	E	C	R	T	L	C	V	V	Q	E	G	F	P	T	Y	G	G	L	E	G	G	A	M	E	R	L	A	V	G	L	Y	D	G	M	N	L	D	W	L	A	Y	R	I	A	.	.	.	.	Q	V	Q	Y	L	V	D	G	L	E	E	I	G	V
Query Conservation																																																																.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.																																.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.
Template Sequence		W	R	L	G	F	V	A	A	P	S	W	I	I	E	R	M	V	K	F	Q	M	Y	.	.	.	.	.	.	.	.	.	N	A	T	C	P	V	T	F	I	Q	Y	A	A	A	K	A	L	K	D	E	R	S	W	K	A	V	E	E	M	R	K	E	Y	D	R	R	R	K	L	V	W	K	R	L	N	E	M	G	L
Template Known Secondary structure		G																					T	.	.	.	.	.	.	.	.	.	T	T		S														T																													T	T
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.										.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
		351	.	.	.	.		.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		V	C	Q	Q	A	.	G	G	H	A	A	F	V	D	A	G	K	L	L	P	H	I	P	A	D	Q	F	P	A	Q	A	L	A	C	E	L	Y	K	V	A	G	I	R	A	V	E	I	G	S	F	L	L	G	R	D	P	K	T	G	K	Q	L	P	C	P	A	E	L	L	R	L	T	I	P	R	A	T	Y	T	Q
Query Conservation							.
Alig confidence							.									.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.													.	.	.
Template Conservation																.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.													.	.	.
Template Sequence		P	T	V	K	P	K	G	A	F	Y	I	F	P	R	.	.	.	.	.	.	.	I	R	D	T	G	L	T	S	K	K	F	S	E	L	M	L	K	E	A	R	V	A	V	V	P	G	S	A	F	.	.	.	.	.	.	.	.	.	.	.	G	K	A	G	E	G	Y	V	R	I	S	Y	.	.	.	A	T	A	Y
Template Known Secondary structure								B	T	T					B	.	.	.	.	.	.	.		G	G	G	T														T							G	G	G	G	.	.	.	.	.	.	.	.	.	.	.		G	G	G	T	T	B						.	.	.		S
Template Predicted Secondary structure																.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.													.	.	.
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.	.	.								.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.												.	.	.	.	.	.	360	.	.	.	.	.				.	.	.	.
		430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	H	M	D	F	I	I	E	A	F	K	H	V	K	E	N	A	A	N	I	K	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	K	L	E	E	A	M	D	R	M	E	R	V	L	K	E	R	K	L	V	E	E
Template Known Secondary structure																		T	T
Template Predicted Secondary structure
Template SS confidence
		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions