 |
Job Description | P0A853 | Confidence | 63.18% | Date | Thu Jan 5 11:06:55 GMT 2012 |
Rank | 297 | Aligned Residues | 68 |
% Identity | 22% | Template | d1ea9c3 |
SCOP info | TIM beta/alpha-barrel
| (Trans)glycosidases
| Amylase, catalytic domain
|
Resolution | 3.2 |
|
 |
  |   |
158 | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | F | D | T | G | V | R | Y | D | F | K | G | N | F | D | L | E | G | L | E | R | G | I | E | E | V | G | P | N | N | V | P | Y | I | V | A | T | I | T | S | N | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
S | A | G | G | Q | P | V | S | L | A | N | L | K | A | M | Y | S | I | A | K | K | Y | D | I | P | V |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |
|
|   |   |   |   |   |   |   |
|   |   |
|   |   |
|
|   |   |   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |
| . | . |
|   |   |
|
|   |   |   |
|
|
|
|
|   |
|
|
|   |   |
|   |
|   |
|
|   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |   |
|
|   |   |   |
|
|   |   |
|
|   |   |
|
|   |   |   |
|   |   |
|
|   |
|
Template Sequence |   |
S | A | D | P | T | P | S | C | F | F | G | G | . |
. |
D | L | Q | G | V | I | D | H | L | D | H | L | S | K | L | G | V | N | A | V | Y | F | T | P | L | F | K | A | T | T | N | H | K | Y | D | T | E | D | Y | F | Q | I | D | P | Q | F | G | D | K | D | T | L | K | K | L | V | D | L | C | H | E | R | G | I | R | V |
Template Known Secondary structure |   |
S | S | S |
|
|
| S | S |
|
|
|
| . | . |
|  |  |  |  |  |  | T |  |  |  |  |  |  |  | T |
| S |  |  |  |  |
|
|
| S | S |
| S | S | S | S | T | T | S |
| S |
| T | T |
|
|
| T | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  | T | T | T | T |
|  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
158 | . | 160 | . | . | . | . | . | . | . | . | . | |
|
170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . |
  |
  |   |
225 | . | . |
Predicted Secondary structure |   |
 |  |  |
Query SS confidence |   |
|
|
|
Query Sequence |   |
V | M | D |
Query Conservation |   |
  |   |
|
Alig confidence |   |
|
|
|
Template Conservation |   |
|
|
|
Template Sequence |   |
L | L | D |
Template Known Secondary structure |   |
 |  |  |
Template Predicted Secondary structure |   |
 |  |  |
Template SS confidence |   |
|
|
|
  |   |
236 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|