Return to main results Retrieve Phyre Job Id

Job DescriptionP0A853
Confidence99.90%DateThu Jan 5 11:06:55 GMT 2012
Rank125Aligned Residues356
% Identity12%Templated1e5ea_
SCOP infoPLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like
Resolution2.18

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   28.30.........40.........50.........60........ .70..... ....80.........90.........100..
Predicted Secondary structure 




















...



..










Query SS confidence 








































. . .






. .


























Query Sequence  EEAIIKSGMNPFLLDSEDVFIDLLTDSGTGAVTQSMQAAMM. . . RGDEAYS. . GSRSYYALAESVKNIFGYQYTIPTHQG
Query Conservation 
      
 
   
      


 


 
   
     

 ... 

  

.. 
 
   


  
 
 
 
  
   

Alig confidence 





















.







.








...






..


























Template Conservation   
   
             

 .   
    .                 
 
   

   

  

 
 
        

Template Sequence  ATACIHANPQKDQFGAAIPPIY. QTSTFVFD. NCQQGGNRFAGQESGYIYTRLGNPTVSNLEGKIAFLEKTEACVATSSG
Template Known Secondary structure  SS



TT

SS



.

SB


S.STTSS
S

BTTT

T
SSS
Template Predicted Secondary structure 














.

.



















Template SS confidence 















































































   910.........20.........30 ........ .40.........50.........60.........70.........80......
 
   103......110.........120.........130.........140.........150.........160.........170.........180..
Predicted Secondary structure 







































Query SS confidence 















































































Query Sequence  RGAEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEE
Query Conservation 
 
  

       
                 
  
  
 
   
     
               
 

   
   
  
Alig confidence 

























.....






















...............










Template Conservation    

  

 

   

 

     
 .....             

 
   
  ...............
   
      
Template Sequence  MGAIAATVLTILKAGDHLISDECLYG. . . . . CTHALFEHALTKFGIQVDFINTA. . . . . . . . . . . . . . . IPGEVKKHMKP
Template Known Secondary structure 

TT
S


.....TTT

TT...............STT

T
Template Predicted Secondary structure 









.....





...............


Template SS confidence 















































































   87..90.........100.........110.. .......120.........130..... ....140......
 
   183......190.........200.........210.........220.........230.........240.........250.........260..
Predicted Secondary structure 



































Query SS confidence 















































































Query Sequence  VGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYAD
Query Conservation          
 
    
  

       
  
  

   
  
  
 

             
        
        
Alig confidence  ....













.












..














............










......

Template Conservation  .... 
  
      
  .
       
    ..       

 
   
............          
...... 
Template Sequence  . . . . NTKIVYFETPANPT. LKIIDMERVCKDA. . HSQEGVLVIADNTFC. . . . . . . . . . . . SPMITNPVDFG. . . . . . VD
Template Known Secondary structure  ....TSS
TTT.




..TSTT

TTT............
TTT

GGGGT......
S
Template Predicted Secondary structure  ....








.




..







............










......
Template SS confidence 















































































   147..150.........160 .........170... ......180........ .190......... 200.
 
   263......270....... ..280.........290.........300.........310.........320.........330.........
Predicted Secondary structure 








...




















Query SS confidence 














. . .





























































Query Sequence  MLAMSAKKDAMVPMG. . . GLLCMKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMNLDWLAYRIAQVQ
Query Conservation    
 
  
  
 
 
...
 
   
                  
    

       
 
 

        
        
Alig confidence 














...















.......
























..











Template Conservation      
  
 
 
      
 
             .......              
      
 

..  
       
 
Template Sequence  VVVHSATKYINGHTDVVAGLICGKADLLQQIRMV. . . . . . . GIKDITGSVISPHDAWLITRGLSTL. . NIRMKAESENAM
Template Known Secondary structure  TTTTTT
SS




T.......










TT..
Template Predicted Secondary structure 









.......










..
Template SS confidence 















































































   202.......210.........220.........230..... ....240.........250.........260 .........270..
 
   340.........350. ........360.........370.........380.........390.........400.........410..
Predicted Secondary structure 



.......


































Query SS confidence 











. . . . . . .




























































Query Sequence  YLVDGLEEIGVV. . . . . . . CQQAGGHAAFVDAGKLLPHIPADQFPAQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLP
Query Conservation   
   
   
  .......
   


 
 

     
               
    

                     
Alig confidence 











.......































....
























Template Conservation   

  
     
  
    
   
   
            
          ....      
    
  
 
   

   
Template Sequence  KVAEYLKSHPAVEKVYYPGFEDHEGHDIAKKQMRMYGSMITFILKSGFEGA. . . . KKLLDNLKLITLAVSLGGCESLIQH
Template Known Secondary structure  T
TT
TT
SSSTT
SS

STT....T
SSSSS


SSS

Template Predicted Secondary structure 

















....
















Template SS confidence 















































































   273......280.........290.........300.........310.........320... ......330.........340........
 
   413 ......420.........430.........440....
Predicted Secondary structure 
..................









Query SS confidence 
. . . . . . . . . . . . . . . . . .






























Query Sequence  C. . . . . . . . . . . . . . . . . . PAELLRLTIPRATYTQTHMDFIIEAFKHVKE
Query Conservation   ..................    


 

    
 



    

  
  
Alig confidence 
..................












.
















Template Conservation 
                

    







 .  


  
  

  
 
Template Sequence  PASMTHAVVPKEEREAAGITDGMIRLSVGIED. ADELIADFKQGLDALLR
Template Known Secondary structure  GGGTTTTTS
TT

TT

SS
.
Template Predicted Secondary structure 


















.

Template SS confidence 

















































   349350.........360.........370.........380 .........390.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions