Job Description P0A853 Confidence 99.90% Date Thu Jan 5 11:06:55 GMT 2012 Rank 124 Aligned Residues 354 % Identity 14% Template d1bw0a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like Resolution 2.50

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		42	.	.	.	.	.	.	.	50						.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.						.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.															.	.	.	.
Predicted Secondary structure											.	.	.	.	.																							.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.																							.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	S	E	D	V	F	I	D	L	.	.	.	.	.	L	T	D	S	G	T	G	A	V	T	Q	S	M	Q	A	A	M	M	R	G	D	E	.	.	.	.	.	A	Y	S	G	S	R	S	Y	Y	A	L	A	E	S	V	K	N	I	F	G	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	Y	T	I
Query Conservation											.	.	.	.	.																							.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.									.														.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.
Template Sequence		P	S	P	K	P	I	I	K	L	S	V	G	D	P	T	L	D	K	N	L	L	T	.	S	A	A	Q	I	K	K	L	K	E	A	I	D	S	Q	E	C	N	G	Y	F	P	T	V	G	S	P	E	A	R	E	A	V	A	T	W	W	R	N	S	F	V	H	K	E	E	L	K	S	T	I	V	K	D	N	V	V
Template Known Secondary structure			S		S										T	T	T	T	S		S			.														T	T		S	S	S				T	T																				S	T	T	T	G	G	G			G	G	G
Template Predicted Secondary structure																								.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	T	H	Q	G	R	G	A	E	Q	I	Y	I	P	V	L	I	K	K	R	E	Q	E	K	G	L	D	R	S	K	M	V	A	F	S	N	Y	F	F	D	T	T	Q	G	H	S	Q	I	N	G	C	T	V	R	N	V	Y	I	K	E	A	F	D	T	G	V	R	Y	D	F	K	G	N	F	D	L	E	G	L	E
Query Conservation
Alig confidence																														.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.
Template Sequence		L	C	S	G	G	S	H	G	I	L	M	A	I	T	A	I	C	D	A	G	D	Y	A	L	V	P	Q	P	.	.	.	.	.	.	.	.	.	G	F	P	H	Y	E	T	V	C	K	A	Y	G	I	G	M	H	F	Y	N	C	R	P	.	.	.	.	.	.	.	.	E	N	D	W	E	A	D	L	D	E	I	R
Template Known Secondary structure				S																T	T								S	.	.	.	.	.	.	.	.	.			T									T	T										G	.	.	.	.	.	.	.	.	G	G	T	T
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.										.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.									160	.	.	.	.	.	.	.	.	.	170	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	I	E	E	V	G	P	N	N	V	P	Y	I	V	A	T	I	T	S	N	S	A	G	G	Q	P	V	S	L	A	N	L	K	A	M	Y	S	I	A	K	K	Y	D	I	P	V	V	M	D	S	A	R	F	A	E	N	A	Y	F	I	K	Q	R	E	A	E	Y	K	D	W	T	I	E	Q	I	T	R	E	T
Query Conservation
Alig confidence							.	.	.	.															.																																.	.	.	.	.	.	.
Template Conservation							.	.	.	.															.																																.	.	.	.	.	.	.
Template Sequence		R	L	K	D	D	.	.	.	.	K	T	K	L	L	I	V	T	N	P	S	N	P	C	.	G	S	N	F	S	R	K	H	V	E	D	I	V	R	L	A	E	E	L	R	L	P	L	F	S	D	E	I	Y	A	G	.	.	.	.	.	.	.	M	V	F	K	G	K	D	P	N	A	T	F	T	S	V	A	D	F
Template Known Secondary structure						T	.	.	.	.	T								S	S		T	T	T	.																				T								T	T	T	T	.	.	.	.	.	.	.		B			S	S		T	T						T	T	S	S
Template Predicted Secondary structure							.	.	.	.															.																																.	.	.	.	.	.	.
Template SS confidence
		172	.	.	.	.					.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.								.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.			.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure																					.	.
Query SS confidence																					.	.
Query Sequence		Y	K	Y	A	D	M	L	A	M	S	A	K	K	D	A	M	V	P	M	.	.	G	G	L	L	C	M	K	D	D	S	F	F	D	V	Y	T	E	C	R	T	L	C	V	V	Q	E	G	F	P	T	Y	G	G	L	E	G	G	A	M	E	R	L	A	V	G	L	Y	D	G	M	N	L	D	W	L	A	Y	R	I
Query Conservation																					.	.
Alig confidence																					.	.																																																			.
Template Conservation																																																																									.
Template Sequence		E	T	T	V	P	R	V	I	L	G	G	T	A	N	L	V	V	P	G	W	R	L	G	W	L	L	Y	V	D	P	H	G	N	G	P	S	F	L	E	G	L	K	R	V	G	M	L	V	C	G	P	C	T	V	V	Q	A	A	L	G	E	A	L	L	N	T	P	Q	E	H	L	.	D	Q	I	V	A	K	I	E
Template Known Secondary structure				S													S		G	G	G										T	T		S																T		S														S	S						.
Template Predicted Secondary structure																																																																									.
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310		.	.	.	.	.	.	.	.
		336	.	.	.	340	.	.	.	.	.	.	.	.		.	350	.	.	.	.	.		.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.
Predicted Secondary structure															.								.
Query SS confidence															.								.
Query Sequence		A	Q	V	Q	Y	L	V	D	G	L	E	E	I	.	G	V	V	C	Q	Q	A	.	G	G	H	A	A	F	V	D	A	G	K	L	L	P	H	I	P	A	D	Q	F	P	A	Q	A	L	A	C	E	L	Y	K	V	A	G	I	R	A	V	E	I	G	S	F	L	L	G	R	D	P	K	T	G	K	Q	L	P	C
Query Conservation															.								.
Alig confidence															.								.													.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	S	A	M	Y	L	Y	N	H	I	G	E	C	I	G	L	A	P	T	M	P	R	G	A	M	Y	L	M	S	R	I	D	L	E	.	.	.	K	Y	R	D	I	K	T	D	V	E	F	F	E	K	L	L	E	E	E	N	V	Q	V	L	.	.	.	.	.	.	.	.	.	.	.	.	.	P	G	T	I	F	H
Template Known Secondary structure												T	T	S	T	T								B	T	T								G	G	.	.	.	G	B	S	S			S																		.	.	.	.	.	.	.	.	.	.	.	.	.		G	G	G	G	T
Template Predicted Secondary structure																																				.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.				.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.														.	.	380	.	.	.
		414	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	E	L	L	R	L	T	I	P	R	A	T	Y	T	Q	T	H	M	D	F	I	I	E	A	F	K	H	V	K	E	N
Query Conservation
Alig confidence											.	.	.
Template Conservation											.	.	.
Template Sequence		A	P	G	F	T	R	L	T	T	.	.	.	T	R	P	V	E	V	Y	R	E	A	V	E	R	I	K	A	F	C	Q	R
Template Known Secondary structure			T	T							.	.	.		S
Template Predicted Secondary structure											.	.	.
Template SS confidence
		384	.	.	.	.	.	390	.	.				.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions