Job Description P0A853 Confidence 99.95% Date Thu Jan 5 11:06:55 GMT 2012 Rank 69 Aligned Residues 329 % Identity 15% Template d1bs0a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.65

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		44	.	.	.	.	.	50	.	.	.	.	.						.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.								.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure														.	.	.	.	.																	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.																	.	.	.	.	.	.	.
Query Sequence		E	D	V	F	I	D	L	L	T	D	S	G	.	.	.	.	.	T	G	A	V	T	Q	S	M	Q	A	A	M	M	R	G	D	.	.	.	.	.	.	.	E	A	Y	S	G	S	R	S	Y	Y	A	L	A	E	S	V	K	N	I	F	G	Y	Q	Y	T	I	P	T	H	Q	G	R	G	A	E	Q	I	Y	I	P
Query Conservation														.	.	.	.	.																	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.																	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	R	Q	Y	L	N	F	S	S	N	D	Y	L	G	L	S	H	H	P	Q	I	I	R	A	W	Q	Q	G	A	E	Q	F	G	I	G	S	G	G	S	G	H	V	S	G	Y	S	V	V	H	Q	A	L	E	E	E	L	A	E	W	L	G	Y	S	R	A	L	L	F	I	S	G	F	A	A	N	Q	A	V	I	A
Template Known Secondary structure		T							S				T	T	S	G	G	G																	S				S	B	T	T	T	T																		T		S						S
Template Predicted Secondary structure
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	I	K	K	R	E	Q	E	K	G	L	D	R	S	K	M	V	A	F	S	N	Y	F	F	D	T	T	Q	G	H	S	Q	I	N	G	C	T	V	R	N	V	Y	I	K	E	A	F	D	T	G	V	R	Y	D	F	K	G	N	F	D	L	E	G	L	E	R	G	I	E	E	V	G	P	N	N	V	P	Y	I
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Conservation																			.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Sequence		A	M	M	A	K	E	D	R	I	A	A	D	R	L	S	H	A	.	.	.	.	.	.	.	.	.	S	L	L	E	A	A	S	L	S	P	S	Q	L	R	R	F	A	H	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	V	T	H	L	A	R	L	L	A	S	P	C	.	P	G	Q	Q	M	V
Template Known Secondary structure						T	T							T	T				.	.	.	.	.	.	.	.	.								T	S	S	S							T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											S			.	S	S
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.										.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.																.	.	.	.	.	.	160	.	.	.	.	.	.		.	.	.	170	.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	T	I	T	S	N	S	A	G	G	Q	P	V	S	L	A	N	L	K	A	M	Y	S	I	A	K	K	Y	D	I	P	V	V	M	D	S	A	R	F	A	E	N	A	Y	F	I	K	Q	R	E	A	E	Y	K	D	W	T	I	E	Q	I	T	R	E	T	Y	K	Y	A	D	M	L	A	M	S	A	K	K	D
Query Conservation
Alig confidence												.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	T	E	G	V	F	S	M	D	G	.	.	.	.	D	S	A	P	L	A	E	I	Q	Q	V	T	Q	Q	H	N	G	W	L	M	V	D	D	A	H	G	T	.	.	.	.	.	.	.	.	.	.	.	G	V	I	G	E	Q	G	R	G	S	C	W	L	Q	K	V	K	P	E	L	L	V	V	T	F	G	K	G
Template Known Secondary structure					S	B		T	T	T		.	.	.	.		B													T	T								T	T	T	T	.	.	.	.	.	.	.	.	.	.	.	T	T	S	S	G	G	G							T	T				S						S	S	S	T
Template Predicted Secondary structure												.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.					.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.												210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	V	P	M	G	G	L	L	C	M	K	D	D	S	F	F	D	V	Y	T	E	C	R	T	L	C	V	V	Q	E	G	F	P	T	Y	G	G	L	E	G	G	A	M	E	R	L	A	V	G	L	Y	D	G	M	N	L	D	W	L	A	Y	R	I	A	Q	V	Q	Y	L	V	D	G	L	E	E	I	G	V	V
Query Conservation
Alig confidence														.	.	.	.	.
Template Conservation														.	.	.	.	.
Template Sequence		F	G	V	S	G	A	A	V	L	C	S	S	.	.	.	.	.	T	V	A	D	Y	L	L	Q	F	A	R	H	L	I	Y	S	T	S	M	P	P	A	Q	A	Q	A	L	R	A	S	L	A	V	I	R	S	D	E	G	D	A	R	R	E	K	L	A	A	L	I	T	R	F	R	A	G	V	Q	D	L	P	F	T
Template Known Secondary structure		T	S	S										.	.	.	.	.															S	S	B																			S																						T	T	S	S
Template Predicted Secondary structure														.	.	.	.	.
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.						250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.					.	.	.	.	420	.	.	.	.	.	.	.
Predicted Secondary structure																																																																		.	.	.	.
Query SS confidence																																																																		.	.	.	.
Query Sequence		C	Q	Q	A	G	G	H	A	A	F	V	D	A	G	K	L	L	P	H	I	P	A	D	Q	F	P	A	Q	A	L	A	C	E	L	Y	K	V	A	G	I	R	A	V	E	I	G	S	F	L	L	G	R	D	P	K	T	G	K	Q	L	P	C	P	A	.	.	.	.	E	L	L	R	L	T	I	P	R	A	T	Y
Query Conservation																																																																		.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.							.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.
Template Sequence		L	A	D	S	C	S	A	I	Q	P	L	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	G	D	N	S	R	A	L	Q	L	A	E	K	L	R	Q	Q	G	C	W	V	T	A	I	R	P	P	T	V	P	A	G	T	A	R	L	R	L	T	.	L	T	A	A	H
Template Known Secondary structure				S			S	S	B					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S														T	T								T	T	S	S		T	T							B	.			T	T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.
Template SS confidence
		313	.	.	.	.	.	.	320	.	.	.	.																								.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.		.	.	.	.	.
		428	.	430	.	.	.	.	.	.	.	.	.	440	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Q	T	H	M	D	F	I	I	E	A	F	K	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	M	Q	D	I	D	R	L	L	E	V	L	H	G
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		369	370	.	.	.	.	.	.	.	.	.	380	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions