Job Description P0A853 Confidence 99.95% Date Thu Jan 5 11:06:55 GMT 2012 Rank 70 Aligned Residues 352 % Identity 16% Template d1b9ha_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.00

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		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure																																																																.
Query SS confidence																																																																.
Query Sequence		T	D	S	G	T	G	A	V	T	Q	S	M	Q	A	A	M	M	R	G	D	E	A	Y	S	G	S	R	S	Y	Y	A	L	A	E	S	V	K	N	I	F	G	Y	Q	Y	T	I	P	T	H	Q	G	R	G	A	E	Q	I	Y	I	P	V	L	.	I	K	K	R	E	Q	E	K	G	L	D	R	S	K	M	V	A
Query Conservation																																																																.
Alig confidence																																																																.																.	.
Template Conservation																																																																																.	.
Template Sequence		W	P	Q	Y	D	D	A	E	R	N	G	L	V	R	A	L	E	Q	G	Q	W	W	R	M	G	G	D	E	V	N	S	F	E	R	E	F	A	A	H	H	G	A	A	H	A	L	A	V	T	N	G	T	H	A	L	E	L	A	L	Q	V	M	G	V	G	P	G	T	E	V	I	V	P	A	F	T	F	I	.	.
Template Known Secondary structure		S	S																T	S			B	T	T	T		S													T	T		S						S													T	T			T	T							S	S	S		T	.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure
Query SS confidence
Query Sequence		F	S	N	Y	F	F	D	T	T	Q	G	H	S	Q	I	N	G	C	T	V	R	N	V	Y	I	K	E	A	F	D	T	G	V	R	Y	D	F	K	G	N	F	D	L	E	G	L	E	R	G	I	E	E	V	G	P	N	N	V	P	Y	I	V	A	T	I	T	S	N	S	A	G	G	Q	P	V	S	L	A	N	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.													.	.	.	.
Template Conservation		.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.													.	.	.	.
Template Sequence		.	.	.	.	.	.	.	S	S	S	Q	A	A	Q	R	L	G	A	V	T	V	P	V	D	V	D	A	A	.	.	.	.	.	.	.	.	.	T	Y	N	L	D	P	E	A	V	A	A	A	V	T	P	.	.	.	.	.	.	.	R	T	K	V	I	M	P	V	H	M	A	G	.	.	.	.	L	M	A	D	M
Template Known Secondary structure		.	.	.	.	.	.	.									T	T								B		T	T	.	.	.	.	.	.	.	.	.	T			B											T	.	.	.	.	.	.	.	T							B		G	G	G	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.													.	.	.	.
Template SS confidence
									90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110										.	.	.	.	.	.	.	.	.	120	.	.	.	.	.								.	.	.	.	130	.	.	.	.	.	.	.					.	.	140	.	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	M	Y	S	I	A	K	K	Y	D	I	P	V	V	M	D	S	A	R	F	A	E	N	A	Y	F	I	K	Q	R	E	A	E	Y	K	D	W	T	I	E	Q	I	T	R	E	T	Y	K	Y	A	D	M	L	A	M	S	A	K	K	D	A	M	V	P	M	G	G	L	L	C	M	K	D	D	S	F	F	D	V
Query Conservation
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	A	L	A	K	I	S	A	D	T	G	V	P	L	L	Q	D	A	A	H	A	H	G	A	R	W	Q	G	K	R	V	G	E	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	I	A	T	F	S	F	Q	N	G	K	L	M	T	A	G	E	G	G	A	V	V	F	P	D	G	E	T	E	K	Y
Template Known Secondary structure												T			B					T	T		T	T				T	T			G	G	G	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S								T	T	S	S	S		S	S	S								T	T
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.															.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.							.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.		.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.		.	350	.	.	.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure																	.	.	.	.	.	.																							.																						.
Query SS confidence																	.	.	.	.	.	.																							.																						.
Query Sequence		Y	T	E	C	R	T	L	C	V	V	Q	E	G	F	P	.	.	.	.	.	.	T	Y	G	G	L	E	G	G	A	M	E	R	L	A	V	G	L	Y	D	G	M	N	.	L	D	W	L	A	Y	R	I	A	Q	V	Q	Y	L	V	D	G	L	E	E	I	.	G	V	V	C	Q	Q	A	G	G	H	A	A	F	V
Query Conservation																	.	.	.	.	.	.																							.																						.
Alig confidence																	.	.	.	.	.	.																							.																						.
Template Conservation
Template Sequence		E	T	A	F	L	R	H	S	C	G	R	P	R	D	D	R	R	Y	F	H	K	I	A	G	S	N	M	R	L	N	E	F	S	A	S	V	L	R	A	Q	L	A	R	L	D	E	Q	I	A	V	R	D	E	R	W	T	L	L	S	R	L	L	G	A	I	D	G	V	V	P	Q	G	G	D	V	R	A	D	R	N
Template Known Secondary structure								T	B	T	T			T	T		S	S					S				B		B		B												T	T																					T	S	T	T								T	T			B
Template Predicted Secondary structure
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.					.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.													.	.	.	.	.	.	420	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	A	G	K	L	L	P	H	I	P	A	D	Q	F	P	A	Q	A	L	A	C	E	L	Y	K	V	A	G	I	R	A	V	E	.	.	.	.	I	G	S	F	L	L	G	R	D	P	K	T	G	K	Q	L	P	C	.	.	.	.	.	.	.	.	.	.	.	.	P	A	E	L	L	R	L	T	I	P	R	A	T
Query Conservation																																			.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	H	Y	M	A	M	F	R	I	P	G	L	T	E	E	R	R	N	A	L	V	D	R	L	V	E	A	G	L	P	A	F	A	A	F	R	A	I	Y	R	T	D	A	F	W	E	L	G	A	P	D	E	S	V	D	A	I	A	R	R	C	P	N	T	D	A	I	S	S	D	C	V	W	L	H	H	R	V	L	L
Template Known Secondary structure				S							T	T																T	T										G	G	G	S						S	S			S	S								T																G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
		427	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	T	Q	T	H	M	D	F	I	I	E	A	F	K	H	V	K	E	N	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	G	E	P	E	L	H	A	T	A	E	I	I	A	D	A	V	A	R	A
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		369	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions