Return to main results Retrieve Phyre Job Id

Job DescriptionP0A853
Confidence99.87%DateThu Jan 5 11:06:55 GMT 2012
Rank150Aligned Residues371
% Identity16%Templated1b5pa_
SCOP infoPLP-dependent transferase-like PLP-dependent transferases AAT-like
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50........ .60.........70.........80..
Predicted Secondary structure 































.









Query SS confidence 






















































.























Query Sequence  FKHLPEPFRIRVIEPVKRTTRAYREEAIIKSGMNPFLLDSEDVFIDLLTDSGTGA. VTQSMQAAMMRGDEAYSGSRSYYA
Query Conservation      
 
                

      
 
   
      


 


 
  . 
     

  

  

 
 
   
Alig confidence 




..



































......





.























Template Conservation      
..             
   
         

 
     ......       
  
           
    
   
Template Sequence  MRGLS. . RRVQAMKPSATVAVNAKALELRRQGVDLVALTAGEP. . . . . . DFDTPEHVKEAARRALAQGKTKYAPPAGIPE
Template Known Secondary structure 




..



TT





SS
......SS


TT

S


TT

Template Predicted Secondary structure 
..














......
















Template SS confidence 















































































   1.... ....10.........20.........30.........40. ........50.........60.........70..
 
   83......90 .........100.........110.........120.........130.........140.........150....
Predicted Secondary structure  ........




























Query SS confidence 







. . . . . . . .































































Query Sequence  LAESVKNI. . . . . . . . FGYQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTVRNVY
Query Conservation 


  
 
........ 
 
  
   


 
  

       
                 
  
  
 
   
     
 
Alig confidence 







........


































.........



















Template Conservation 

  

               
  
 
   

      
   

 

   
......... 
          
   
   
Template Sequence  LREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSP. . . . . . . . . YWVSYPEMVRFAGGVVVEVE
Template Known Secondary structure  TT




GGGS

TT
S.........

TTT
Template Predicted Secondary structure 












.........




Template SS confidence 















































































   73......80.........90.........100.........110.........120... ......130.........140...
 
   155....160.........170.........180.........190.........200.........210.........220.........230....
Predicted Secondary structure 






































Query SS confidence 















































































Query Sequence  IKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAEN
Query Conservation                
 

   
   
          
 
    
  

       
  
  

   
  
  
 

    
Alig confidence 


........
















....













.





























...
Template Conservation     ........                 ....           

 .
          
          

 

   ...
Template Sequence  TLP. . . . . . . . EEGFVPDPERVRRAITP. . . . RTKALVVNSPNNPT. GAVYPKEVLEALARLAVEHDFYLVSDEIYE. . .
Template Known Secondary structure 

G........GGTT


TT

T....TSS
TTT.




TT

TTT...
Template Predicted Secondary structure 


........








....











.













...
Template SS confidence 















































































   144.. ...150.........160... ......170....... ..180.........190.........200.......
 
   235....240.........250.........260.........270.........280.........290.........300.........310....
Predicted Secondary structure 










































Query SS confidence 















































































Query Sequence  AYFIKQREAEYKDWTIEQITRETYKYADMLAMSAKKDAMVPMGGLLCMKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGA
Query Conservation           
        
        
  
 
  
  
 
 

 
   
                  
    

     
Alig confidence  .......






















































....













Template Conservation  .......                         

     
                      ....              
Template Sequence  . . . . . . . HLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKEVIKAMASVSRQ. . . . STTSPDTIAQWATL
Template Known Secondary structure  .......T
BSSS



GGGT
TTTSTTTTT
GGG



T....TT
S

Template Predicted Secondary structure  .......


































....





Template SS confidence 















































































   208.210.........220.........230.........240.........250.........260.. .......270......
 
   315....320.........330.........340.........350..... ....360.........370.........380.........390...
Predicted Secondary structure 









.


















Query SS confidence 








































.





































Query Sequence  MERLAVGLYDGMNLDWLAYRIAQVQYLVDGLEEIGVVCQQA. GGHAAFVDAGKLLPHIPADQFPAQALACELYKVAGIRA
Query Conservation    
 
 

        
         
   
   
  
   .


 
 

     
               
    

  
Alig confidence 








































.











........

















Template Conservation    
                           
   
     
  
    
     ........      
   
   

 
Template Sequence  EALTNQEASRAFVEMAREAYRRRRDLLLEGLTALGLKAVRPSGAFYVLMDTSPI. . . . . . . . APDEVRAAERLLEAGVAV
Template Known Secondary structure 
T

B


SBTT
TTT........
SSTT
Template Predicted Secondary structure 
















........





Template SS confidence 















































































   277..280.........290.........300.........310.........320.........330 .........340........
 
   394.....400.........410.........420.........430.........440..
Predicted Secondary structure 






















Query SS confidence 
















































Query Sequence  VEIGSFLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHV
Query Conservation                          


 

    
 



    

  
Alig confidence 
.............














...
















Template Conservation   ............. 
  
     



 ...    
 
   
 

   
Template Sequence  V. . . . . . . . . . . . . PGTDFAAFGHVRLSY. . . ATSEENLRKALERFARV
Template Known Secondary structure  .............SGGGT
TT
...
S
GGGG
Template Predicted Secondary structure  .............







...


Template SS confidence 
















































   349 350.........360.... .....370.........380.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions