Job Description P0A853 Confidence 99.93% Date Thu Jan 5 11:06:55 GMT 2012 Rank 90 Aligned Residues 336 % Identity 15% Template c3uwcA_ PDB info PDB header:transferase Chain: A: PDB Molecule:nucleotide-sugar aminotransferase; PDBTitle: structure of an aminotransferase (degt-dnrj-eryc1-strs family) from2 coxiella burnetii in complex with pmp Resolution 1.80 Å

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		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.
Query SS confidence																																																							.
Query Sequence		Q	S	M	Q	A	A	M	M	R	G	D	E	A	Y	S	G	S	R	S	Y	Y	A	L	A	E	S	V	K	N	I	F	G	Y	Q	Y	T	I	P	T	H	Q	G	R	G	A	E	Q	I	Y	I	P	V	L	.	I	K	K	R	E	Q	E	K	G	L	D	R	S	K	M	V	A	F	S	N	Y	F	F	D	T	T
Query Conservation																																																							.
Alig confidence																	.	.																																					.																.	.	.	.	.	.	.	.	.
Template Conservation																	.	.																																																					.	.	.	.	.	.	.	.	.
Template Sequence		N	D	L	R	E	F	I	K	T	A	D	F	T	L	G	.	.	A	E	L	E	K	F	E	K	R	F	A	A	L	H	N	A	P	H	A	I	G	V	G	T	G	T	D	A	L	A	X	S	F	K	X	L	N	I	G	A	G	D	E	V	I	T	C	A	N	T	F	I	.	.	.	.	.	.	.	.	.	A	S
Template Known Secondary structure											T			S	S		.	.														T	T		S						S													T	T			T	T							S	S	S			.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																	.	.																																																					.	.	.	.	.	.	.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.			.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.										.	.
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	G	H	S	Q	I	N	G	C	T	V	R	N	V	Y	I	K	E	A	F	D	T	G	V	R	Y	D	F	K	G	N	F	D	L	E	G	L	E	R	G	I	E	E	V	G	P	N	N	V	P	Y	I	V	A	T	I	T	S	N	S	A	G	G	Q	P	V	S	L	A	N	L	K	A	M	Y	S	I	A	K	K
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.													.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.													.	.	.	.
Template Sequence		V	G	A	I	V	Q	A	G	A	T	P	V	L	V	D	S	E	N	.	.	.	.	.	.	.	.	.	.	G	Y	V	I	D	P	E	K	I	E	A	A	I	T	D	.	.	.	.	.	.	.	K	T	K	A	I	X	P	V	H	Y	T	G	.	.	.	.	N	I	A	D	X	P	A	L	A	K	I	A	K	K
Template Known Secondary structure								T	T								B		T	.	.	.	.	.	.	.	.	.	.	T	S	S	B		G	G	G	T	G	G	G			T	.	.	.	.	.	.	.	T							B		G	G	G	.	.	.	.
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.													.	.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.											.	.	.	110	.	.	.	.	.	.	.	.	.	120	.								.	.	.	.	.	.	.	.	130	.	.	.					.	.	.	.	.	.	140	.	.	.	.	.	.	.
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.		.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.
Query SS confidence																																																										.
Query Sequence		Y	D	I	P	V	V	M	D	S	A	R	F	A	E	N	A	Y	F	I	K	Q	R	E	A	E	Y	K	D	W	T	I	E	Q	I	T	R	E	T	Y	K	Y	A	D	M	L	A	M	S	A	K	K	D	A	M	V	P	.	M	G	G	L	L	C	M	K	D	D	S	F	F	D	V	Y	T	E	C	R	T	L	C
Query Conservation																																																										.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	N	L	H	I	V	E	D	A	C	Q	T	I	L	G	R	I	N	D	K	F	V	G	S	W	G	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	A	C	F	S	L	H	P	L	K	N	L	N	V	W	S	D	A	G	V	I	I	T	H	S	D	E	Y	A	E	K	L	R	L	Y	R	N	H	G
Template Known Secondary structure		T	T								T	T		T	T				T	T			T	T	S	S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.							S	S	S	S	S	S			S	S								S												T	B	T	T
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.															.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.			.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
Predicted Secondary structure																															.	.
Query SS confidence																															.	.
Query Sequence		V	V	Q	E	G	F	P	T	Y	G	G	L	E	G	G	A	M	E	R	L	A	V	G	L	Y	D	G	M	N	.	.	L	D	W	L	A	Y	R	I	A	Q	V	Q	Y	L	V	D	G	L	E	E	I	G	V	V	C	Q	Q	A	G	G	H	A	A	F	V	D	A	G	K	L	L	P	H	I	P	A	D	Q	F
Query Conservation																															.	.
Alig confidence																															.	.																																.	.	.
Template Conservation																																																																.	.	.
Template Sequence		L	I	N	R	D	V	C	V	E	Y	G	I	N	C	R	X	D	T	I	Q	A	V	I	A	N	R	L	X	N	Q	L	E	T	I	T	E	K	R	R	G	I	A	H	L	Y	D	Q	S	F	V	D	L	S	E	F	I	D	V	P	V	R	R	.	.	.	E	G	V	Y	H	V	F	H	I	Y	V	L	R	V	K
Template Known Secondary structure					T	T			S	S				B		B													G	G	G																			T	G	G	G	T	T	T								.	.	.	T	T						S	S						T
Template Predicted Secondary structure																																																																.	.	.
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.				.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
		377	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.											.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.
Query Sequence		P	A	Q	A	L	A	C	E	L	Y	K	V	A	G	I	R	A	V	E	I	G	S	F	L	L	G	R	D	P	K	T	G	K	Q	L	P	C	P	A	E	.	.	.	.	.	.	.	.	.	.	L	L	R	L	T	I	P	R	A	T	Y	T	Q	T	H	M	D	F	I	I	E	A	F	K	H	V	K	E	N	A
Query Conservation																																										.	.	.	.	.	.	.	.	.	.
Alig confidence														.																												.	.	.	.	.	.	.	.	.	.										.
Template Conservation														.																																															.
Template Sequence		Y	R	D	Q	L	F	Q	Y	L	K	D	N	.	G	I	E	V	K	I	H	Y	P	I	A	X	H	L	Q	P	A	A	K	S	L	G	Y	Q	Q	G	D	F	P	X	A	E	K	H	G	E	A	V	I	T	L	P	A	H	P	Y	.	L	T	E	E	E	I	N	Y	I	I	K	K	V	R	E	F	Y	L	E	K
Template Known Secondary structure		T											T	.	T	B			B		S		S	S		G	G	G	S	G	G	G	G	G	G				T	T	S																		T	T	.	S																		T	T
Template Predicted Secondary structure														.																																															.
Template SS confidence
		291	.	.	.	.	.	.	.	.	300	.	.		.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.		.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
		447
Predicted Secondary structure
Query SS confidence
Query Sequence		A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		369

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions