Job Description P0A853 Confidence 99.93% Date Thu Jan 5 11:06:55 GMT 2012 Rank 88 Aligned Residues 346 % Identity 17% Template c3tqxA_ PDB info PDB header:transferase Chain: A: PDB Molecule:2-amino-3-ketobutyrate coenzyme a ligase; PDBTitle: structure of the 2-amino-3-ketobutyrate coenzyme a ligase (kbl) from2 coxiella burnetii Resolution 2.30 Å

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		44	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.												.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure																.																	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.																	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	D	V	F	I	D	L	L	T	D	S	G	T	G	.	A	V	T	Q	S	M	Q	A	A	M	M	R	G	D	E	A	.	.	.	.	.	.	.	.	.	.	.	Y	S	G	S	R	S	Y	Y	A	L	A	E	S	V	K	N	I	F	G	Y	Q	Y	T	I	P	T	H	Q	G	R	G	A	E	Q	I	Y	I	P
Query Conservation																.																	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	K	E	V	L	N	F	C	A	N	N	Y	L	G	L	A	D	H	P	A	L	I	K	T	A	Q	T	V	V	E	Q	Y	G	F	G	X	A	S	V	R	F	I	C	G	T	Q	T	I	H	K	E	L	E	K	D	I	S	E	F	L	G	T	D	D	T	I	L	Y	S	S	C	F	D	A	N	G	G	L	F	E
Template Known Secondary structure		T							S	S			T	T	S		T	T																	S				S																							T		S						S								T	T
Template Predicted Secondary structure
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	I	K	K	R	E	Q	E	K	G	L	D	R	S	K	M	V	A	F	S	N	Y	F	F	D	T	T	Q	G	H	S	Q	I	N	G	C	T	V	R	N	V	Y	I	K	E	A	F	D	T	G	V	R	Y	D	F	K	G	N	F	D	L	E	G	L	E	R	G	I	E	E	V	G	P	N	N	V	P	Y	I
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.														.
Template Conservation																.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.														.
Template Sequence		T	L	L	G	P	E	D	A	I	I	S	D	E	L	.	.	.	.	.	.	.	.	.	N	H	A	S	I	I	D	G	I	R	L	C	K	A	Q	R	Y	R	Y	K	N	N	A	X	G	.	.	.	.	.	.	.	.	.	.	.	.	D	L	E	A	K	L	K	E	A	D	E	K	G	.	A	R	F	K	L	I
Template Known Secondary structure						T	T							T	T	.	.	.	.	.	.	.	.	.											S			S							T	T		T	T	.	.	.	.	.	.	.	.	.	.	.	.											T	T	T	.		S	S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.														.
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.										.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.													.	.	160	.	.	.	.	.	.	.	.	.	170		.	.	.	.	.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	T	I	T	S	N	S	A	G	G	Q	P	V	S	L	A	N	L	K	A	M	Y	S	I	A	K	K	Y	D	I	P	V	V	M	D	S	A	R	F	A	E	N	A	Y	F	I	K	Q	R	E	A	E	Y	K	D	W	T	I	E	Q	I	T	R	E	T	Y	K	Y	A	D	M	L	A	M	S	A	K	K	D
Query Conservation
Alig confidence																.	.	.	.																												.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.																												.	.	.	.	.	.	.	.	.
Template Sequence		A	T	D	G	V	F	S	X	D	G	I	I	A	D	.	.	.	.	L	K	S	I	C	D	L	A	D	K	Y	N	A	L	V	X	V	D	D	S	H	A	V	G	F	I	G	.	.	.	.	.	.	.	.	.	E	N	G	R	G	T	P	E	Y	C	G	V	A	D	R	V	D	I	L	T	G	T	L	G	K	A
Template Known Secondary structure					S			T	T	T	T					.	.	.	.											T	T								T	T	T	T	T	T	S	S	.	.	.	.	.	.	.	.	.	T	T	S								T		T	T			S						S	S	S	S
Template Predicted Secondary structure																.	.	.	.																												.	.	.	.	.	.	.	.	.
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190					.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.										.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	V	P	M	G	G	L	L	C	M	K	D	D	S	F	F	D	V	Y	T	E	C	R	T	L	C	V	V	Q	E	G	F	P	T	Y	G	G	L	E	G	G	A	M	E	R	L	A	V	G	L	Y	D	G	M	N	L	D	W	L	A	Y	R	I	A	Q	V	Q	Y	L	V	D	G	L	E	E	I	G	V	V
Query Conservation
Alig confidence																													.	.	.	.	.
Template Conservation																													.	.	.	.	.
Template Sequence		L	G	G	A	S	G	G	Y	T	S	G	H	K	E	I	I	E	W	L	R	N	R	S	R	P	Y	L	.	.	.	.	.	F	S	N	T	V	A	P	V	I	V	A	T	S	L	K	V	L	E	L	L	K	T	E	G	P	Q	L	R	K	Q	L	Q	E	N	S	R	Y	F	R	A	G	X	E	K	L	G	F	Q
Template Known Secondary structure		S		S	S																								.	.	.	.	.	S	S																					T																							T
Template Predicted Secondary structure																													.	.	.	.	.
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270						.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	Q	Q	A	G	G	H	A	A	F	V	D	A	G	K	L	L	P	H	I	P	A	D	Q	F	P	A	Q	A	L	A	C	E	L	Y	K	V	A	G	I	R	A	V	E	I	G	S	F	L	L	G	R	D	P	K	T	G	K	Q	L	P	C	P	A	E	L	L	R	L	T	I	P	R	A	T	Y	T	Q	T	H
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.								.
Template Conservation																	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.								.
Template Sequence		L	V	P	G	N	H	P	I	I	P	V	X	L	G	D	.	.	.	.	.	.	.	.	.	A	Q	L	A	T	N	X	A	D	H	L	L	Q	E	G	I	Y	V	V	G	F	S	Y	P	V	V	P	X	G	.	.	.	.	.	.	.	.	.	.	K	A	R	I	R	V	Q	.	X	S	A	V	H	T	Q	Q	Q
Template Known Secondary structure		B				S	S	S									.	.	.	.	.	.	.	.	.														T	T								T	T	T	S		T	T	.	.	.	.	.	.	.	.	.	.								.			T	T
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.								.
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.										.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.											.	.	.	.	.	.	.		370	.	.	.	.	.	.	.	.
		432	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	D	F	I	I	E	A	F	K	H	V	K	E	N	A	A	N	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	D	R	A	I	E	A	F	G	Q	V	G	K	K	L	G	A	I
Template Known Secondary structure																T	T
Template Predicted Secondary structure
Template SS confidence
		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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