Job Description P0A853 Confidence 99.75% Date Thu Jan 5 11:06:55 GMT 2012 Rank 223 Aligned Residues 314 % Identity 11% Template c3qm2A_ PDB info PDB header:transferase Chain: A: PDB Molecule:phosphoserine aminotransferase; PDBTitle: 2.25 angstrom crystal structure of phosphoserine aminotransferase2 (serc) from salmonella enterica subsp. enterica serovar typhimurium Resolution 2.25 Å

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		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.					.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure																																									.	.	.	.
Query SS confidence																																									.	.	.	.
Query Sequence		G	T	G	A	V	T	Q	S	M	Q	A	A	M	M	R	G	D	E	A	Y	S	G	S	R	S	Y	Y	A	L	A	E	S	V	K	N	I	F	G	Y	.	.	.	.	Q	Y	T	I	P	T	H	Q	G	R	G	A	E	Q	I	Y	I	P	V	L	I	K	K	R	E	Q	E	K	G	L	D	R	S	K	M	V	A
Query Conservation																																									.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.																		.	.	.	.																												.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.																																																	.	.	.	.	.	.	.	.
Template Sequence		G	P	A	M	L	P	A	E	V	L	K	L	A	Q	.	.	.	.	.	.	.	.	Q	E	V	A	E	E	A	E	Q	D	F	R	D	L	L	N	I	P	S	N	Y	K	V	L	F	C	H	G	G	G	R	G	Q	F	A	G	V	P	L	N	L	L	G	D	K	T	T	A	.	.	.	.	.	.	.	.	D	Y
Template Known Secondary structure		S	S												T	.	.	.	.	.	.	.	.																T			T	T								S		T	T												T	T					.	.	.	.	.	.	.	.
Template Predicted Secondary structure																.	.	.	.	.	.	.	.																																																	.	.	.	.	.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.									.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.									.	.
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure
Query SS confidence
Query Sequence		F	S	N	Y	F	F	D	T	T	Q	G	H	S	Q	I	N	G	C	T	V	R	N	V	Y	I	K	E	A	F	D	T	G	V	R	Y	D	F	K	G	N	F	D	L	E	G	L	E	R	G	I	E	E	V	G	P	N	N	V	P	Y	I	V	A	T	I	T	S	N	S	A	G	G	Q	P	V	S	L	A	N	L
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.																		.	.	.																.						.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.																		.	.	.																.						.	.	.	.
Template Sequence		V	D	A	G	Y	W	A	A	S	A	I	K	E	A	K	K	Y	C	A	P	Q	I	I	D	A	K	I	.	.	.	.	.	.	.	.	T	V	D	G	K	R	A	V	K	P	M	R	E	W	Q	L	S	.	.	.	D	N	A	A	Y	L	H	Y	C	P	N	E	T	I	D	.	G	I	A	I	D	.	.	.	.
Template Known Secondary structure				S	S											T	T	T	S										.	.	.	.	.	.	.	.			T	T							G	G	G					.	.	.	T	T		S						S			T	T	T	.	T					.	.	.	.
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.																		.	.	.																.						.	.	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.									.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140				.	.	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.	160
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	M	Y	S	I	A	K	K	Y	D	I	P	V	V	M	D	S	A	R	F	A	E	N	A	Y	F	I	K	Q	R	E	A	E	Y	K	D	W	T	I	E	Q	I	T	R	E	T	Y	K	Y	A	D	M	L	A	M	S	A	K	K	D	A	M	V	P	M	G	G	L	L	C	M	K	D	D	S	F	F	D	V
Query Conservation
Alig confidence		.							.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.
Template Conservation		.							.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.
Template Sequence		.	E	T	P	D	F	G	.	.	P	E	V	V	V	T	A	D	F	S	S	T	I	L	S	A	P	L	D	V	S	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	G	V	I	Y	A	G	A	Q	K	N	I	G	P	A	G	L	T	L	V	I	V	R	E	.	.	.	.	D	L
Template Known Secondary structure		.							.	.	T	T								T	T	T	T	T	S	S				G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S						T	T	T	T	T			T	T								G	.	.	.	.	G	G
Template Predicted Secondary structure		.							.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.
Template SS confidence
			161	.	.	.	.	.			.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.																				.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.					.	.
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	T	E	C	R	T	L	C	V	V	Q	E	G	F	P	T	Y	G	G	L	E	G	G	A	M	E	R	L	A	V	G	L	Y	D	G	M	N	L	D	W	L	A	Y	R	I	A	Q	V	Q	Y	L	V	D	G	L	E	E	I	G	V	V	C	Q	Q	A	G	G	H	A	A	F	V	D	A	G	K	L	L	P	H
Query Conservation
Alig confidence																																																												.	.	.
Template Conservation																																																												.	.	.
Template Sequence		L	G	K	A	H	E	S	C	P	S	I	L	D	Y	T	V	L	N	D	N	P	T	F	A	W	Y	L	S	G	L	V	F	K	W	L	K	A	Q	G	G	V	A	A	M	H	K	I	N	Q	Q	K	A	E	L	L	Y	G	V	.	.	.	I	D	N	S	D	F	Y	R	N	D	V	A	Q	A	N	R	S	R	M
Template Known Secondary structure			S				T	T	S		G	G	G											S																T																				.	.	.			T		S	S					B		G	G	G	B		S	S
Template Predicted Secondary structure																																																												.	.	.
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.				.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.				.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.
Predicted Secondary structure																		.	.	.
Query SS confidence																		.	.	.
Query Sequence		I	P	A	D	Q	F	P	A	Q	A	L	A	C	E	L	Y	.	.	.	K	V	A	G	I	R	A	V	E	I	G	S	F	L	L	G	R	D	P	K	T	G	K	Q	L	P	C	P	A	E	L	L	R	L	T	I	P	R	A	T	Y	T	Q	T	H	M	D	F	I	I	E	A	F	K	H	V	K	E	N
Query Conservation																		.	.	.
Alig confidence																		.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Sequence		N	V	P	F	Q	L	A	D	N	T	L	D	K	V	F	L	E	E	S	F	A	A	G	L	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	K	G	H	R	V	V	G	G	M	R	A	S	I	Y	N	A	M	.	P	I	E	G	V	K	A	L	T	D	F	M	I	D	F	E	R	R
Template Known Secondary structure								S	S	G	G	G											T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			B			T	T	T		S							T	T	S	.
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.																.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.		.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions