Job Description P0A853 Confidence 99.86% Date Thu Jan 5 11:06:55 GMT 2012 Rank 164 Aligned Residues 325 % Identity 16% Template c3op7A_ PDB info PDB header:transferase Chain: A: PDB Molecule:aminotransferase class i and ii; PDBTitle: crystal structure of a plp-dependent aminotransferase (zp_03625122.1)2 from streptococcus suis 89-1591 at 1.70 a resolution Resolution 1.70 Å

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		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.				.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure																																							.	.	.
Query SS confidence																																							.	.	.
Query Sequence		G	A	V	T	Q	S	M	Q	A	A	M	M	R	G	D	E	A	Y	S	G	S	R	S	Y	Y	A	L	A	E	S	V	K	N	I	F	G	Y	.	.	.	Q	Y	T	I	P	T	H	Q	G	R	G	A	E	Q	I	Y	I	P	V	L	I	K	K	R	E	Q	E	K	G	L	D	R	S	K	M	V	A	F	S	N
Query Conservation																																							.	.	.
Alig confidence																																							.	.	.																																				.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		G	T	N	P	E	D	F	Y	K	K	L	Q	G	T	K	L	N	Y	G	W	I	E	G	S	P	A	F	K	K	S	V	S	Q	L	Y	T	G	V	K	P	E	Q	I	L	Q	T	N	G	A	T	G	A	N	L	L	V	L	Y	S	L	I	E	P	G	D	H	V	I	S	L	Y	P	T	Y	Q	.	.	.	.	.
Template Known Secondary structure		T												T	S			S	S			T	T											T	T	S	S	S			G	G	G					S																T	T								S	S		T	.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	F	F	D	T	T	Q	G	H	S	Q	I	N	G	C	T	V	R	N	V	Y	I	K	E	A	F	D	T	G	V	R	Y	D	F	K	G	N	F	D	L	E	G	L	E	R	G	I	E	E	V	G	P	N	N	V	P	Y	I	V	A	T	I	T	S	N	S	A	G	G	Q	P	V	S	L	A	N	L	K	A	M
Query Conservation
Alig confidence		.	.	.	.																					.	.	.	.	.	.	.	.																		.	.	.	.															.
Template Conservation		.	.	.	.																					.	.	.	.	.	.	.	.																		.	.	.	.															.
Template Sequence		.	.	.	.	Q	L	Y	D	I	P	K	S	L	G	A	E	V	D	L	W	Q	I	E	E	.	.	.	.	.	.	.	.	E	N	G	W	L	P	D	L	E	K	L	R	Q	L	I	R	P	.	.	.	.	T	T	K	X	I	C	I	N	N	A	N	N	P	T	.	G	A	V	X	D	R	T	Y	L	E	E	L
Template Known Secondary structure		.	.	.	.									T	T										G	.	.	.	.	.	.	.	.	G	G	T	T													T	.	.	.	.	T								S	S		T	T	T	.
Template Predicted Secondary structure		.	.	.	.																					.	.	.	.	.	.	.	.																		.	.	.	.															.
Template SS confidence
						116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.									.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.					.	.	.	.	.	.	.	160	.	.	.	.	.	.		.	.	.	170	.	.	.	.	.	.	.	.
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	S	I	A	K	K	Y	D	I	P	V	V	M	D	S	A	R	F	A	E	N	A	Y	F	I	K	Q	R	E	A	E	Y	K	D	W	T	I	E	Q	I	T	R	E	T	Y	K	Y	A	D	M	L	A	M	S	A	K	K	D	A	M	V	P	M	G	G	L	L	C	M	K	D	D	S	F	F	D	V	Y	T	E
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	E	I	A	S	E	V	G	A	Y	I	L	S	D	E	V	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	R	S	F	S	E	L	D	V	P	S	I	I	E	V	Y	D	K	G	I	A	V	N	S	L	S	T	Y	S	L	P	G	I	R	I	G	W	V	A	A	N	H	Q	V	T	D	I	L	R	D	Y
Template Known Secondary structure							T	T	T									S	.	.	.	.	.	.	.	.	.	.	.	.	.				S	S	S										T	T											S		G	G	G																T	T	T
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.														.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.			.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure																																																												.	.
Query SS confidence																																																												.	.
Query Sequence		C	R	T	L	C	V	V	Q	E	G	F	P	T	Y	G	G	L	E	G	G	A	M	E	R	L	A	V	G	L	Y	D	G	M	N	L	D	W	L	A	Y	R	I	A	Q	V	Q	Y	L	V	D	G	L	E	E	I	G	V	V	.	.	C	Q	Q	A	G	G	H	A	A	F	V	D	A	G	K	L	L	P	H	I
Query Conservation																																																												.	.
Alig confidence							.	.	.	.	.	.	.																																															.	.																	.	.	.	.
Template Conservation							.	.	.	.	.	.	.																																																																	.	.	.	.
Template Sequence		R	D	Y	T	X	.	.	.	.	.	.	.	I	C	A	G	V	F	D	D	L	V	A	Q	L	A	L	A	H	Y	Q	E	I	L	E	R	N	R	H	I	L	E	E	N	L	A	I	L	D	Q	W	I	E	E	E	P	L	V	S	Y	I	R	P	A	V	V	S	T	S	F	V	K	I	A	V	D	.	.	.	.
Template Known Secondary structure		G	G	G	T	T	.	.	.	.	.	.	.	S																T																											T	T							S	S	S	S									S	.	.	.	.
Template Predicted Secondary structure							.	.	.	.	.	.	.																																																																	.	.	.	.
Template SS confidence
		247	.	.	250	.								.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
		372	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	D	Q	F	P	A	Q	A	L	A	C	E	L	Y	K	V	A	G	I	R	A	V	E	I	G	S	F	L	L	G	R	D	P	K	T	G	K	Q	L	P	C	P	A	E	L	L	R	L	T	I	P	R	A	T	Y	T	Q	T	H	M	D	F	I	I	E	A	F	K	H	V	K	E	N	A	A
Query Conservation
Alig confidence		.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Template Conservation		.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Template Sequence		.	.	.	.	X	P	X	E	D	F	C	L	Q	L	L	Q	E	H	G	V	L	L	V	.	.	.	.	.	.	.	.	.	.	.	.	.	P	G	N	R	F	E	R	D	G	Y	V	R	L	G	F	A	C	.	.	.	E	Q	E	T	L	I	K	G	L	E	K	L	S	Q	F	L	R	R	F	D
Template Known Secondary structure		.	.	.	.	S																			.	.	.	.	.	.	.	.	.	.	.	.	.		G	G	G	G	T		T	T								S	.	.	.																	G	G	G
Template Predicted Secondary structure		.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Template SS confidence
						316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.														.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.				.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions