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Job DescriptionP0A853
Confidence99.98%DateThu Jan 5 11:06:55 GMT 2012
Rank39Aligned Residues376
% Identity11%Templatec3nx3A_
PDB info PDB header:transferaseChain: A: PDB Molecule:acetylornithine aminotransferase; PDBTitle: crystal structure of acetylornithine aminotransferase (argd) from2 campylobacter jejuni
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30.........40.........50.........60.........70...... ...80.....
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Query Sequence  PEPFRIRVIEPVKRTTRAYREEAIIKSGMNPFLLDSEDVFIDLLTDSGTGAVTQSMQAAMMRGDEAYSG. . SRSYYALAE
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Template Sequence  RFDIVLEKGQGVYLFDDKAKKYLDFSSGIGVCALGYNHAKF. . . . . . . . . . . NAKIKAQVDKLLHTSNLYYNENIAAAAK
Template Known Secondary structure  S
S

BTTT

SST
TT
BS
...........TT
S


TTS

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   17..20.........30.........40.........50....... ..60.........70.........80.....
 
   86...90.........100.........110.........120.........130.........140.........150.........160.....
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Query Sequence  SVKNIFGYQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRY
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Template Sequence  NLAKASALERVFFTNSGTESIEGAXKTARKYAFNKGVKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAK
Template Known Secondary structure  T
SSSTT
TT
TT



SSTT


GGG
S

S

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   86...90.........100.........110.........120.........130.........140.........150.........160.....
 
   166...170.........180.........190.........200.........210.........220.........230.........240.....
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Query Sequence  DFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEY
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Template Sequence  YN. . . . DISSVEKLVNE. . . . KTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQC. . . . . . . . . . . . GX
Template Known Secondary structure  TT....
TT

T....TS
TTS


T

TTT............TT
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   166. ..170........ .180.........190.........200.........210.........220... ..
 
   246...250.........260.........270.........280.........290.........300.........310.........320.....
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Query Sequence  KDWTIEQITRETYKYADMLAMSAKKDAMVPMGGLLCMKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDG
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Template Conservation     
            
  
 

    
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Template Sequence  GRSGKFFAYEHAQILPDIXTSAKALGCGLSVGAFVINQKVASNSLEAGDHG. . . . . . . . . STYGGNPLVCAGVNAVFEIF
Template Known Secondary structure  TTTSSSSGGGGGT


S
GGGTTTS


S
TT

S.........S
BS

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   226...230.........240.........250.........260.........270...... ...280.........290......
 
   326...330.........340.........350.........360.........370.........380.........390.........400.....
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Query Sequence  MNLDWLAYRIAQVQYLVDGLEEIGVVCQQAGGHAAFVDAGKLLPHIPADQFPAQALACELYKVAGIRAVEIGSFLLGRDP
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Template Sequence  KEEKILENVNKLTPYLEQSLDEL. . . INEFDFCKKRKGLGFXQGLSLDKSVKVAKVIQKCQ. ENALLLISCG. . . . . . . .
Template Known Secondary structure  TT...
TTTT
TTS
.TT
T........
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   297..300.........310......... 320.........330.........340.........350.... .....360....
 
   406...410.........420.........430.........440.....
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Query Sequence  KTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKEN
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Template Sequence  . . . . . . . . . ENDLRFL. PPLILQKEHIDEXSEKLRKALKS
Template Known Secondary structure  .........TT
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TT

T
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   365....370. ........380.........390....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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