Job Description P0A853 Confidence 99.92% Date Thu Jan 5 11:06:55 GMT 2012 Rank 100 Aligned Residues 333 % Identity 11% Template c3nnkC_ PDB info PDB header:transferase Chain: C: PDB Molecule:ureidoglycine-glyoxylate aminotransferase; PDBTitle: biochemical and structural characterization of a ureidoglycine2 aminotransferase in the klebsiella pneumoniae uric acid catabolic3 pathway Resolution 2.58 Å

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		55	.	.	.	.	60	.	.	.	.	.	.	.	.				.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.				.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.																												.	.	.
Query SS confidence																.	.	.																												.	.	.
Query Sequence		G	T	G	A	V	T	Q	S	M	Q	A	A	M	M	.	.	.	R	G	D	E	A	Y	S	G	S	R	S	Y	Y	A	L	A	E	S	V	K	N	I	F	G	Y	Q	Y	.	.	.	T	I	P	T	H	Q	G	R	G	A	E	Q	I	Y	I	P	V	L	I	K	K	R	E	Q	E	K	G	L	D	R	S	K	M
Query Conservation																.	.	.																												.	.	.
Alig confidence																.	.	.																												.	.	.																																	.
Template Conservation																																																																																	.
Template Sequence		G	P	I	N	A	D	P	R	V	L	R	A	M	S	S	Q	L	I	G	Q	Y	D	P	A	M	T	H	Y	M	N	E	V	M	A	L	Y	R	G	V	F	R	T	E	N	R	W	T	M	L	V	D	G	T	S	R	A	G	I	E	A	I	L	V	S	A	I	R	P	G	D	K	V	L	V	P	V	F	G	R	.
Template Known Secondary structure		S													T	S					T	T																				T				S						S	S																T										S		.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	F	S	N	Y	F	F	D	T	T	Q	G	H	S	Q	I	N	G	C	T	V	R	N	V	Y	I	K	E	A	F	D	T	G	V	R	Y	D	F	K	G	N	F	D	L	E	G	L	E	R	G	I	E	E	V	G	P	N	N	V	P	Y	I	V	A	T	I	T	S	N	S	A	G	G	Q	P	V	S	L	A
Query Conservation
Alig confidence		.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.																.	.	.																	.	.	.	.
Template Conservation		.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.																.	.	.																	.	.	.	.
Template Sequence		.	.	.	.	.	.	F	G	H	L	L	C	E	I	A	R	R	C	R	A	E	V	H	T	I	E	V	P	W	.	.	.	.	.	.	.	.	.	.	G	E	V	F	T	P	D	Q	V	E	D	A	V	K	R	.	.	.	I	R	P	R	L	L	L	T	V	Q	G	D	T	S	T	T	.	.	.	.	M	L	Q
Template Known Secondary structure		.	.	.	.	.	.												T	T										T	.	.	.	.	.	.	.	.	.	.	T															.	.	.				S						S			T	T	T	T	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.																.	.	.																	.	.	.	.
Template SS confidence
								99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.											.	.	.	.	.	.	.	.	130	.	.	.	.	.	.				.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.					.	.	.
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	K	A	M	Y	S	I	A	K	K	Y	D	I	P	V	V	M	D	S	A	R	F	A	E	N	A	Y	F	I	K	Q	R	E	A	E	Y	K	D	W	T	I	E	Q	I	T	R	E	T	Y	K	Y	A	D	M	L	A	M	S	A	K	K	D	A	M	V	P	M	G	G	L	L	C	M	K	D	D	S	F	F
Query Conservation
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	L	A	E	L	G	E	I	C	R	R	Y	D	A	L	F	Y	T	D	A	T	A	S	L	G	G	N	P	L	E	T	D	V	W	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	A	V	S	A	G	M	Q	C	L	G	G	P	S	G	T	S	P	I	T	L	S	A	R	M	E	E
Template Known Secondary structure				T	T								T	T								T	T	T	B	T	T	B				T	T	T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S													S	S
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190																		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		289	290	.	.	.	.	.	.	.	.	.	300																												.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.				.	.	330	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.
Query Sequence		D	V	Y	T	E	C	R	T	L	C	V	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	E	G	F	P	T	Y	G	G	L	E	G	G	A	M	E	R	L	A	V	G	L	Y	D	G	M	N	.	.	.	L	D	W	L	A	Y	R	I	A	Q	V
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.
Template Conservation
Template Sequence		A	I	R	R	R	K	C	V	E	E	G	I	R	T	D	A	H	R	D	G	D	E	E	M	I	Y	S	N	Y	F	D	L	G	M	V	M	D	Y	W	G	P	E	R	L	N	H	H	T	E	A	T	T	A	L	F	G	A	R	E	C	A	R	L	I	L	Q	E	G	L	D	Y	G	I	A	R	H	K	L	H	G
Template Known Secondary structure					T	T					T	T	S			T	T					S	S				S		S	T	T										S	T	T				S	S
Template Predicted Secondary structure
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Y	L	V	D	G	L	E	E	I	G	V	V	C	Q	Q	A	G	G	H	A	A	F	V	D	A	G	K	L	L	P	H	I	P	A	D	Q	F	P	A	Q	A	L	A	C	E	L	Y	K	V	A	G	I	R	A	V	E	I	G	S	F	L	L	G	R	D	P	K	T	G	K	Q	L	P	C	P	A	E	L	L
Query Conservation
Alig confidence																							.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	A	L	V	K	G	I	Q	A	M	G	L	E	T	F	G	D	L	K	H	K	.	.	.	.	M	N	N	V	L	G	V	V	I	P	Q	G	I	N	G	D	Q	A	R	K	L	M	L	E	D	F	G	I	E	I	G	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S	F	G	P	L	H	G	K	V	W
Template Known Secondary structure											T	T			B		S		G	G	G	B	.	.	.	.		T	T								S	S	S																		B	.	.	.	.	.	.	.	.	.	.	.	.	.				G	G	G	T	T	T
Template Predicted Secondary structure																							.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320					.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.														.	.	.	.	.	.	.	.	360	.	.
		419	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	T	I	P	R	A	T	Y	T	Q	T	H	M	D	F	I	I	E	A	F	K	H	V	K	E	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	I	G	T	M	G	Y	N	A	R	K	D	C	V	M	T	T	L	S	A	L	E	A	V	L	N	Y
Template Known Secondary structure							G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions