Job Description P0A853 Confidence 99.96% Date Thu Jan 5 11:06:55 GMT 2012 Rank 59 Aligned Residues 319 % Identity 12% Template c3mafB_ PDB info PDB header:lyase Chain: B: PDB Molecule:sphingosine-1-phosphate lyase; PDBTitle: crystal structure of stspl (asymmetric form) Resolution 2.97 Å

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		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.							.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.
Query Sequence		Y	A	L	A	E	S	V	K	N	I	F	G	Y	Q	Y	T	.	.	.	.	.	.	I	P	T	H	Q	G	R	G	A	E	Q	I	Y	I	P	V	L	I	K	K	R	E	Q	E	K	G	L	D	R	S	K	M	V	A	F	S	N	Y	F	F	D	T	T	Q	G	H	S	Q	I	N	G	C	T	V	R	N	V	Y
Query Conservation																		.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.																																									.
Template Conservation																																																																.
Template Sequence		A	E	V	V	A	M	T	A	H	M	L	G	G	D	A	A	G	G	T	V	C	G	T	V	T	S	G	G	T	E	S	L	L	L	A	M	K	T	Y	R	D	W	A	R	A	T	K	G	I	T	A	P	E	A	V	V	P	V	S	A	H	A	.	A	F	D	K	A	A	Q	Y	F	G	I	K	L	V	R	T	P
Template Known Secondary structure												T	T	T	T	T	T	T	S								S	S																							S	S							T	T	S		T	.										T
Template Predicted Secondary structure																																																																.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.		.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	K	E	A	F	D	T	G	V	R	Y	D	F	K	G	N	F	D	L	E	G	L	E	R	G	I	E	E	V	G	P	N	N	V	P	Y	I	V	A	T	I	T	S	N	S	A	G	G	Q	P	V	S	L	A	N	L	K	A	M	Y	S	I	A	K	K	Y	D	I	P	V	V	M	D	S	A	R	F	A	E	N
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.	.																.	.	.	.																.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.																.	.	.	.																.	.	.	.
Template Sequence		L	D	A	.	.	.	.	.	.	.	.	.	.	D	Y	R	A	D	V	A	A	M	R	E	A	I	T	P	.	.	.	.	N	T	V	V	V	A	G	S	A	P	G	Y	P	H	G	.	.	.	.	V	V	D	P	I	P	E	I	A	A	L	A	A	E	H	G	I	G	C	H	V	D	A	C	L	G	G	F	I
Template Known Secondary structure		B		T	.	.	.	.	.	.	.	.	.	.	T	S	S	B											T	.	.	.	.	T								T	T		T	T	T		.	.	.	.																T								T	T	T	T	T	T
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.																.	.	.	.																.	.	.	.
Template SS confidence
		220	.	.											.	.	.	.	.	.	.	230	.	.	.	.	.	.	.					.	.	240	.	.	.	.	.	.	.	.	.	250	.	.					.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.		.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.			.	.	.	.	.	.	.	310	.
Predicted Secondary structure																																													.																										.	.
Query SS confidence																																													.																										.	.
Query Sequence		A	Y	F	I	K	Q	R	E	A	E	Y	K	D	W	T	I	E	Q	I	T	R	E	T	Y	K	Y	A	D	M	L	A	M	S	A	K	K	D	A	M	V	P	M	G	.	G	L	L	C	M	K	D	D	S	F	F	D	V	Y	T	E	C	R	T	L	C	V	V	Q	E	.	.	G	F	P	T	Y	G	G	L	E
Query Conservation																																													.																										.	.
Alig confidence																						.	.	.	.	.	.																		.																										.	.
Template Conservation																						.	.	.	.	.	.
Template Sequence		L	P	W	A	E	R	L	G	Y	P	V	P	P	F	D	F	R	L	E	G	.	.	.	.	.	.	V	T	S	V	S	A	D	T	H	K	Y	G	Y	G	A	K	G	T	S	V	I	L	Y	R	R	P	D	L	L	H	Y	Q	Y	F	I	A	A	D	W	P	G	G	L	Y	F	S	P	T	F	A	G	S	R	P
Template Known Secondary structure							T	T	T							S	T	T	S	T	T	.	.	.	.	.	.								T	T	T	T	T				S	S							S	S												S	S		T	T						S	S	S		S	S
Template Predicted Secondary structure																						.	.	.	.	.	.
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.							.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.				.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.		.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.																						.
Query SS confidence																		.	.	.																						.
Query Sequence		G	G	A	M	E	R	L	A	V	G	L	Y	D	G	M	N	.	.	.	L	D	W	L	A	Y	R	I	A	Q	V	Q	Y	L	V	D	G	L	E	E	I	.	G	V	V	C	Q	Q	A	G	G	H	A	A	F	V	D	A	G	K	L	L	P	H	I	P	A	D	Q	F	P	A	Q	A	L	A	C	E	L	Y	K
Query Conservation																		.	.	.																						.
Alig confidence																		.	.	.																						.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	A	L	S	A	T	A	W	A	A	M	L	S	L	G	E	E	G	Y	L	D	A	T	R	R	I	L	Q	A	A	D	R	L	K	A	G	V	R	A	I	P	S	L	K	I	L	G	D	P	L	W	V	I	A	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																																								T	S	T	T				S	S			S	S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.
		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	G	I	R	A	V	E	I	G	S	F	L	L	G	R	D	P	K	T	G	K	Q	L	P	C	P	A	E	L	L	R	L	T	I	P	R	A	T	Y	T	Q	T	H	M	D	F	I	I	E	A	F	K	H	V	K	E	N	A	A	N	I	K
Query Conservation
Alig confidence																												.	.
Template Conservation																												.	.
Template Sequence		S	D	E	L	N	I	Y	Q	V	M	E	E	M	A	G	R	G	W	R	L	N	G	L	H	R	P	.	.	P	A	F	H	V	A	L	T	L	R	H	T	E	P	G	V	V	D	R	F	L	A	D	L	Q	D	A	V	A	Q	V	R	A	H	P
Template Known Secondary structure			S	S	S												T	T							T	T	T	.	.	T								G	G	G	S	S	T	T																		T
Template Predicted Secondary structure																												.	.
Template SS confidence
		412	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.			.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions