Job Description P0A853 Confidence 99.90% Date Thu Jan 5 11:06:55 GMT 2012 Rank 123 Aligned Residues 342 % Identity 14% Template c3l8aB_ PDB info PDB header:lyase Chain: B: PDB Molecule:putative aminotransferase, probable beta-cystathionase; PDBTitle: crystal structure of metc from streptococcus mutans Resolution 1.54 Å

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		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.			.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.									.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.																										.	.	.	.	.	.	.	.
Query SS confidence																							.	.																										.	.	.	.	.	.	.	.
Query Sequence		I	D	L	L	T	D	S	G	T	G	A	V	T	Q	S	M	Q	A	A	M	M	.	.	R	G	D	E	A	Y	S	G	S	R	S	Y	Y	A	L	A	E	S	V	K	N	I	F	G	Y	.	.	.	.	.	.	.	.	Q	Y	T	I	P	T	H	Q	G	R	G	A	E	Q	I	Y	I	P	V	L	I	K	K	R
Query Conservation																							.	.																										.	.	.	.	.	.	.	.
Alig confidence																							.	.																										.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	Q	M	W	V	A	D	M	D	F	L	P	V	P	E	I	K	E	A	I	I	N	Y	G	R	E	H	I	F	G	Y	N	Y	F	N	D	D	L	Y	Q	A	V	I	D	W	E	R	K	E	H	D	Y	A	V	V	K	E	D	I	L	F	I	D	G	V	V	P	A	I	S	I	A	L	Q	A	F	S	E	K	G
Template Known Secondary structure						S	S				S																			S	S																										G	G	G					S														S		T
Template Predicted Secondary structure
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	E	K	G	L	D	R	S	K	M	V	A	F	S	N	Y	F	F	D	T	T	Q	G	H	S	Q	I	N	G	C	T	V	R	N	V	Y	I	K	E	A	F	D	T	G	V	R	Y	D	F	K	G	N	F	D	L	E	G	L	E	R	G	I	E	E	V	G	P	N	N	V	P	Y	I	V	A	T	I	T	S
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.																			.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.																			.	.	.
Template Sequence		D	A	V	L	I	N	S	P	V	Y	Y	.	.	.	.	.	.	.	.	.	P	F	A	R	T	I	R	L	N	D	H	R	L	V	E	N	S	L	Q	I	.	.	.	.	.	.	.	I	N	G	R	F	E	I	D	F	E	Q	L	E	K	D	I	I	D	.	.	.	N	N	V	K	I	Y	L	L	C	S	P	H
Template Known Secondary structure									S				.	.	.	.	.	.	.	.	.									T	T											.	.	.	.	.	.	.		T	T																.	.	.	T	T								S	S	B
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.																			.	.	.
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120										.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140								.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.				.	160	.	.	.	.	.	.	.	.	.	170
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		N	S	A	G	G	Q	P	V	S	L	A	N	L	K	A	M	Y	S	I	A	K	K	Y	D	I	P	V	V	M	D	S	A	R	F	A	E	N	A	Y	F	I	K	Q	R	E	A	E	Y	K	D	W	T	I	E	Q	I	T	R	E	T	Y	K	Y	A	D	M	L	A	M	S	A	K	K	D	A	M	V	P	M	.
Query Conservation																																																																																	.
Alig confidence					.																															.	.	.	.	.	.	.	.																																						.
Template Conservation					.																															.	.	.	.	.	.	.	.
Template Sequence		N	P	G	.	G	R	V	W	D	N	D	D	L	I	K	I	A	E	L	C	K	K	H	G	V	I	L	V	S	D	E	I	H	Q	.	.	.	.	.	.	.	.	D	L	A	L	F	G	N	T	H	H	S	L	N	T	L	D	A	S	Y	K	D	F	T	I	I	L	S	S	A	T	K	T	F	N	I	A	G	T
Template Known Secondary structure		T	T	T	.	T	B																		T								T	T	T	.	.	.	.	.	.	.	.	T		B		T	T						G	G	G	S		T	T	G	G	G	T							S					T		G	G	G
Template Predicted Secondary structure					.																															.	.	.	.	.	.	.	.
Template SS confidence
		171	.	.		.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.									.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
			277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.			.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.		.	350	.	.
Predicted Secondary structure		.																																																				.	.																						.
Query SS confidence		.																																																				.	.																						.
Query Sequence		.	G	G	L	L	C	M	K	D	D	S	F	F	D	V	Y	T	E	C	R	T	L	C	V	V	Q	E	G	F	P	T	Y	G	G	L	E	G	G	A	M	E	R	L	A	V	G	L	Y	D	G	M	N	.	.	L	D	W	L	A	Y	R	I	A	Q	V	Q	Y	L	V	D	G	L	E	E	I	.	G	V	V	C
Query Conservation		.																																																				.	.																						.
Alig confidence		.																							.	.	.	.	.	.	.																							.	.																						.
Template Conservation																									.	.	.	.	.	.	.
Template Sequence		K	N	S	F	A	I	I	Q	N	E	S	L	R	R	K	F	Q	Y	R	Q	L	A	N	.	.	.	.	.	.	.	N	Q	H	E	V	P	T	V	G	M	I	A	T	Q	A	A	F	Q	Y	G	K	P	W	L	E	E	L	K	T	V	I	E	G	N	I	K	L	V	I	K	E	L	E	A	K	T	K	I	K	V
Template Known Secondary structure										S														T	.	.	.	.	.	.	.	T		S																																											S	S
Template Predicted Secondary structure																									.	.	.	.	.	.	.
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.								.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
		353	.	.		.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		Q	Q	A	.	G	G	H	A	A	F	V	D	A	G	K	L	L	P	H	I	P	A	D	Q	F	P	A	Q	A	L	A	C	E	L	Y	K	V	A	G	I	R	A	V	E	I	G	S	F	L	L	G	R	D	P	K	T	G	K	Q	L	P	C	P	A	E	L	L	R	L	T	I	P	R	A	T	Y	T	Q	T	H
Query Conservation					.
Alig confidence					.									.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.										.	.	.
Template Conservation														.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.										.	.	.
Template Sequence		M	E	P	E	G	T	Y	L	V	W	L	D	.	.	.	.	.	.	.	F	S	A	Y	A	I	A	Q	P	Q	L	S	E	K	L	Q	N	E	A	K	V	V	L	N	D	G	A	H	F	G	K	E	G	K	.	.	.	.	.	.	.	.	.	.	.	Y	F	A	R	L	N	V	A	T	.	.	.	P	K	N	T
Template Known Secondary structure					S	B	S	S						.	.	.	.	.	.	.		G	G	G	T			T	T									T	S							G	G	G	G		G	G	G	T	.	.	.	.	.	.	.	.	.	.	.	T								S	.	.	.
Template Predicted Secondary structure														.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.										.	.	.
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.	.								.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360												.	.	.	.	.	.	.	.	.				370	.	.	.
		432	.	.	.	.	.	.	.	440	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	D	F	I	I	E	A	F	K	H	V	K	E	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	Q	E	A	L	S	R	I	I	S	V	F	G	K
Template Known Secondary structure													S
Template Predicted Secondary structure
Template SS confidence
		374	.	.	.	.	.	380	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions