Job Description P0A853 Confidence 99.88% Date Thu Jan 5 11:06:55 GMT 2012 Rank 138 Aligned Residues 349 % Identity 13% Template c3kaxB_ PDB info PDB header:lyase Chain: B: PDB Molecule:aminotransferase, classes i and ii; PDBTitle: crystal structure of a putative c-s lyase from bacillus anthracis Resolution 1.70 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.			.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90									.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																																				.	.																							.	.	.	.	.	.	.	.
Query SS confidence																																				.	.																							.	.	.	.	.	.	.	.
Query Sequence		G	M	N	P	F	L	L	D	S	E	D	V	F	I	D	L	L	T	D	S	G	T	G	A	V	T	Q	S	M	Q	A	A	M	M	.	.	R	G	D	E	A	Y	S	G	S	R	S	Y	Y	A	L	A	E	S	V	K	N	I	.	.	.	.	.	.	.	.	F	G	Y	Q	Y	T	I	P	T	H	Q	G	R	G
Query Conservation																																				.	.																							.	.	.	.	.	.	.	.
Alig confidence							.	.						.																						.	.																							.	.	.	.	.	.	.	.
Template Conservation							.	.						.
Template Sequence		K	W	D	T	Y	.	.	K	N	E	E	L	.	I	H	A	W	I	A	D	X	D	F	E	V	P	Q	P	I	Q	T	A	L	K	K	R	I	E	H	P	I	F	G	Y	T	L	P	P	E	N	I	G	D	I	I	C	N	W	T	K	K	Q	Y	N	W	D	I	Q	K	E	W	I	V	F	S	A	G	I	V	P
Template Known Secondary structure					T	T	.	.	T	T	S			.						S	S		S	S															T	S										T	T																			G	G	G					S
Template Predicted Secondary structure							.	.						.
Template SS confidence
		17	.	.	20	.			.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	Q	I	Y	I	P	V	L	I	K	K	R	E	Q	E	K	G	L	D	R	S	K	M	V	A	F	S	N	Y	F	F	D	T	T	Q	G	H	S	Q	I	N	G	C	T	V	R	N	V	Y	I	K	E	A	F	D	T	G	V	R	Y	D	F	K	G	N	F	D	L	E	G	L	E	R	G	I	E	E	V	G
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.																			.	.
Template Conservation																							.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.																			.	.
Template Sequence		A	L	S	T	S	I	Q	A	F	T	K	E	N	E	S	V	L	V	Q	P	P	.	.	.	.	.	.	.	.	.	I	Y	P	P	F	F	E	X	V	T	T	N	N	R	Q	L	C	V	S	P	L	Q	K	.	.	.	.	.	.	.	Q	N	D	T	Y	A	I	D	F	E	H	L	E	K	Q	F	Q	Q	.	.
Template Known Secondary structure													T	T							S	S	.	.	.	.	.	.	.	.	.												T	T									B		.	.	.	.	.	.	.	S	S	S	S		B												T	.	.
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.																			.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.										.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.								.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	N	N	V	P	Y	I	V	A	T	I	T	S	N	S	A	G	G	Q	P	V	S	L	A	N	L	K	A	M	Y	S	I	A	K	K	Y	D	I	P	V	V	M	D	S	A	R	F	A	E	N	A	Y	F	I	K	Q	R	E	A	E	Y	K	D	W	T	I	E	Q	I	T	R	E	T	Y	K	Y	A	D	M	L
Query Conservation
Alig confidence		.	.															.																															.	.	.	.	.	.	.	.
Template Conservation		.	.															.																															.	.	.	.	.	.	.	.
Template Sequence		.	.	G	V	K	L	X	L	L	C	S	P	H	N	P	I	.	G	R	V	W	K	K	E	E	L	T	K	L	G	S	L	C	T	K	Y	N	V	I	V	V	A	D	E	I	H	S	.	.	.	.	.	.	.	.	D	I	I	Y	A	D	H	T	H	T	P	F	A	S	L	S	E	E	L	A	A	R	T	I	T
Template Known Secondary structure		.	.	T								S	S	B	T	T	T	.	T	B																	T	T								T	T	T	.	.	.	.	.	.	.	.	T		B		T	T						G	G	G	S						T	T
Template Predicted Secondary structure		.	.															.																															.	.	.	.	.	.	.	.
Template SS confidence
				156	.	.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.									200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		265	.	.	.	.	270	.	.	.	.	.	.	.			.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.			.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure															.	.																																																			.	.
Query SS confidence															.	.																																																			.	.
Query Sequence		A	M	S	A	K	K	D	A	M	V	P	M	G	.	.	G	L	L	C	M	K	D	D	S	F	F	D	V	Y	T	E	C	R	T	L	C	V	V	Q	E	G	F	P	T	Y	G	G	L	E	G	G	A	M	E	R	L	A	V	G	L	Y	D	G	M	N	.	.	L	D	W	L	A	Y	R	I	A	Q	V	Q	Y
Query Conservation															.	.																																																			.	.
Alig confidence															.	.																						.	.	.	.	.	.	.																							.	.
Template Conservation																																						.	.	.	.	.	.	.
Template Sequence		C	X	A	P	S	K	T	F	N	I	A	G	L	Q	A	S	I	I	I	I	P	N	E	K	L	R	Q	A	F	T	S	I	Q	Y	R	Q	.	.	.	.	.	.	.	G	F	H	G	L	N	I	F	A	Y	T	A	X	Q	S	A	Y	T	E	C	N	D	W	L	N	E	I	R	F	Y	I	E	D	N	A	K	F
Template Known Secondary structure					S	S	T	G	G	G		G	G	G																							T	.	.	.	.	.	.	.	T																T	T	S
Template Predicted Secondary structure																																						.	.	.	.	.	.	.
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260								.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
		341	.	.	.	.	.	.	.	.	350	.	.	.				.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.
Query SS confidence															.	.	.
Query Sequence		L	V	D	G	L	E	E	I	G	V	V	C	Q	.	.	.	Q	A	G	G	H	A	A	F	V	D	A	G	K	L	L	P	H	I	P	A	D	Q	F	P	A	Q	A	L	A	C	E	L	Y	K	V	A	G	I	R	A	V	E	I	G	S	F	L	L	G	R	D	P	K	T	G	K	Q	L	P	C	P	A	E	L
Query Conservation															.	.	.
Alig confidence															.	.	.											.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	C	E	Y	I	K	D	H	I	P	T	L	S	V	X	K	P	E	G	S	F	L	L	W	I	D	.	.	.	.	.	.	.	C	S	A	L	N	L	S	Q	D	E	R	T	K	L	L	E	E	K	G	K	I	I	V	E	P	G	E	K	Y	.	.	.	.	.	.	.	.	.	.	.	G	L	G	G	E	E	H
Template Known Secondary structure											T	T							S	B	S	S						.	.	.	.	.	.	.		G	G	G															S							S	G	G	G	.	.	.	.	.	.	.	.	.	.	.		T	T	T	T	T
Template Predicted Secondary structure																												.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.								.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.												.	.	.	.	.	.	.
		418	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	L	T	I	P	R	A	T	Y	T	Q	T	H	M	D	F	I	I	E	A	F	K	H	V	K
Query Conservation
Alig confidence									.	.	.
Template Conservation									.	.	.
Template Sequence		I	G	I	N	I	G	C	.	.	.	P	R	S	V	L	E	E	I	L	N	R	L	R	H	T	F
Template Known Secondary structure							S	S	.	.	.																T
Template Predicted Secondary structure									.	.	.
Template SS confidence
		360	.	.	.	.	.	.				.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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