Job Description P0A853 Confidence 99.93% Date Thu Jan 5 11:06:55 GMT 2012 Rank 93 Aligned Residues 313 % Identity 11% Template c3k40B_ PDB info PDB header:lyase Chain: B: PDB Molecule:aromatic-l-amino-acid decarboxylase; PDBTitle: crystal structure of drosophila 3,4-dihydroxyphenylalanine2 decarboxylase Resolution 1.75 Å

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		73	.	.	.	.	.	.	80	.	.	.	.					.	.	.	.	.	90	.	.	.	.	.												.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.												.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.												.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.												.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	Y	S	G	S	R	S	Y	Y	A	L	A	.	.	.	.	E	S	V	K	N	I	F	G	Y	Q	Y	.	.	.	.	.	.	.	.	.	.	.	T	I	P	T	H	Q	G	R	G	A	E	Q	I	Y	I	P	V	L	I	K	K	.	.	.	.	.	.	.	.	.	.	.	R	E	Q	E	K	G	L	D	R	S
Query Conservation														.	.	.	.												.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.												.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	W	I	A	S	P	A	C	T	E	L	E	V	V	M	M	D	W	L	G	K	M	L	E	L	P	A	E	F	L	A	C	S	G	G	K	G	G	G	V	I	Q	G	T	A	S	E	S	T	L	V	A	L	L	G	A	K	A	K	K	L	K	E	V	K	E	L	H	P	E	W	D	E	H	T	I	L	G	K	L
Template Known Secondary structure		S																						T	T			G	G	G		G	G	G	T	S	S							S																										T	T	S							T	T
Template Predicted Secondary structure
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure																																																										.
Query SS confidence																																																										.
Query Sequence		K	M	V	A	F	S	N	Y	F	F	D	T	T	Q	G	H	S	Q	I	N	G	C	T	V	R	N	V	Y	I	K	E	A	F	D	T	G	V	R	Y	D	F	K	G	N	F	D	L	E	G	L	E	R	G	I	E	E	.	V	G	P	N	N	V	P	Y	I	V	A	T	I	T	S	N	S	A	G	G	Q	P	V
Query Conservation																																																										.
Alig confidence												.																					.	.	.	.	.	.	.	.	.	.	.															.																					.	.	.
Template Conservation												.																					.	.	.	.	.	.	.	.	.	.	.																																				.	.	.
Template Sequence		V	G	Y	C	S	D	Q	A	H	S	.	S	V	E	R	A	G	L	L	G	G	V	K	L	R	S	V	Q	S	E	N	.	.	.	.	.	.	.	.	.	.	.	H	R	M	R	G	A	A	L	E	K	A	I	E	Q	D	V	A	E	G	L	I	P	F	Y	A	V	V	T	L	G	T	T	N	S	C	.	.	.
Template Known Secondary structure							T	T	S			.										T									B	T	.	.	.	.	.	.	.	.	.	.	.	T	B															T	T	T										B	S		T	T	T		.	.	.
Template Predicted Secondary structure												.																					.	.	.	.	.	.	.	.	.	.	.																																				.	.	.
Template SS confidence
		184	.	.	.	.	.	190	.	.	.		.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.												.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	A	N	L	K	A	M	Y	S	I	A	K	K	Y	D	I	P	V	V	M	D	S	A	R	F	A	E	N	A	Y	F	I	K	Q	R	E	A	E	Y	K	D	W	T	I	E	Q	I	T	R	E	T	Y	K	Y	A	D	M	L	A	M	S	A	K	K	D	A	M	V	P	M	G	G	L	L	C	M	K	D	D
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	F	D	Y	L	D	E	C	G	P	V	G	N	K	H	N	L	W	I	H	V	D	A	A	Y	A	G	.	.	.	.	.	.	.	.	.	.	.	S	A	F	I	C	P	E	Y	R	H	L	M	K	G	I	E	S	A	D	S	F	N	F	N	P	H	W	M	L	V	N	F	D	C	S	A	M	W	L	K	D	P
Template Known Secondary structure			B													T	T								T	T	G	G	.	.	.	.	.	.	.	.	.	.	.	G	G	G	G	S	G	G	G	G	G	G	G	T	T	G	G	G		S										S			S	S							S	S	T
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.												.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.		.	350	.	.	.		.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure																																																																	.						.
Query SS confidence																																																																	.						.
Query Sequence		S	F	F	D	V	Y	T	E	C	R	T	L	C	V	V	Q	E	G	F	P	T	Y	G	G	L	E	G	G	A	M	E	R	L	A	V	G	L	Y	D	G	M	N	L	D	W	L	A	Y	R	I	A	Q	V	Q	Y	L	V	D	G	L	E	E	I	.	G	V	V	C	Q	.	Q	A	G	G	H	A	A	F	V	D
Query Conservation																																																																	.						.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.						.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	W	V	P	L	G	R	R	F	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	K	L	W	F	V	L	R	L	Y	G	V	E	N	L	Q	A	H	I	R	R	H	C	N	F	A	K	Q	F	G	D	L	C	V	A	D	S	R	F	E	L	A	A	E	I	N	M	G	L	V	C	F	R
Template Known Secondary structure		T						G	G	G		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				T	S	T	T				S	S			B	T	T
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		319	320	.	.	.	.	.	.	.	.																	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
		364	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	K	L	L	P	H	I	P	A	D	Q	F	P	A	Q	A	L	A	C	E	L	Y	K	V	A	G	I	R	A	V	E	I	G	S	F	L	L	G	R	D	P	K	T	G	K	Q	L	P	C	P	A	E	L	L	R	L	T	I	P	R	A	T	Y	T	Q	T	H	M	D	F	I	I	E	A	F	K	H	V	K
Query Conservation
Alig confidence		.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	L	K	G	S	N	E	R	N	E	A	L	L	K	R	I	N	G	R	G	H	I	H	L	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	A	K	I	K	D	V	Y	F	L	R	M	A	I	C	S	R	F	T	Q	S	E	D	M	E	Y	S	W	K	E	V	S	A	A	A
Template Known Secondary structure		.	.	.	.	.	.	.		S	S																T	S		B			.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T											T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
									410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.															.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.
		444	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	N	A	A	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	E	M	E	Q
Template Known Secondary structure						T
Template Predicted Secondary structure
Template SS confidence
		469	470	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions