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Job DescriptionP0A853
Confidence99.83%DateThu Jan 5 11:06:55 GMT 2012
Rank189Aligned Residues346
% Identity17%Templatec3if2B_
PDB info PDB header:transferaseChain: B: PDB Molecule:aminotransferase; PDBTitle: crystal structure of putative amino-acid aminotransferase2 (yp_265399.1) from psychrobacter arcticum 273-4 at 2.50 a resolution
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   74.....80.........90. ........100.........110.........120.........130.........140.....
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Query Sequence  YSGSRSYYALAESVKNIF. . . . . . . . GYQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQI
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Template Sequence  YSNPQGDSAFIDALVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFGGAFVNEKSVDKSILLPLTPEYIGYSDVHVEG
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GGGTT

SSS
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   78.80.........90.........100.........110.........120.........130.........140.........150.......
 
   146...150.........160.........170.........180.........190.........200.........210.........220.....
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Query Sequence  NGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVV
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Template Sequence  QHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKE. GRIGAICCSRPTNPT. GNVLTDEEXAHLAEIAKRYDIPLI
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TT

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   165....170.........180.........190.........200... ......210........ .220.........230.........240..
 
   226...230.........240.........250.........260.........270...... ...280.........290.........300...
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Query Sequence  MDSARFAENAYFIKQREAEYKDWTIEQITRETYKYADMLAMSAKKDAMVPM. . GGLLCMKDDSFFDVYTECRTLCVVQEG
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Template Sequence  IDNAYG. . . . . . . . . . . . XPFPNIIYSDAHLNWDNNTILCFSLSK. IGLPGXRTGIIVADAKVIEAVSAXNAVVNLAPTR
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   243..... .250.........260.........270..... ....280.........290.........300.........
 
   304.....310.........320.........330.........340.........350... ......360.........370.........380..
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Query Sequence  FPTYGGLEGGAMERLAVGLYDGMNLDWLAYRIAQVQYLVDGLEEIGVVCQ. QAGGHAAFVDAGKLLPHIPADQFPAQALA
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Template Sequence  FGAAIATPLVANDRIKQLSDNEIKPFYQKQATLAVKLLKQALGDYPLXIHKPEGAIFLWLW. . . . . . . FKDLPISTLDLY
Template Known Secondary structure  TSTSSSSS


BSS.......TT
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   310.........320.........330.........340.........350.........360.........370 .........380..
 
   383......390.........400.........410.........420.........430.........440........
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Query Sequence  CELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKENAAN
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Template Sequence  ERL. KAKGTLIVPSEYFFPGVDVSDYQHAHE. . . CIRXSIAA. . . DEQTLIDGIKVIGEVVRELYD
Template Known Secondary structure  .TT
GGGS
TTS

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   383.. ....390.........400.........410.. .......420 .........430.........440.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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