Job Description P0A853 Confidence 99.97% Date Thu Jan 5 11:06:55 GMT 2012 Rank 50 Aligned Residues 365 % Identity 15% Template c3i4jC_ PDB info PDB header:transferase Chain: C: PDB Molecule:aminotransferase, class iii; PDBTitle: crystal structure of aminotransferase, class iii from2 deinococcus radiodurans Resolution 1.70 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.				.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																																																															.	.	.
Query SS confidence																																																															.	.	.
Query Sequence		P	E	P	F	R	I	R	V	I	E	P	V	K	R	T	T	R	A	Y	R	E	E	A	I	I	K	S	G	M	N	P	F	L	L	D	S	E	D	V	F	I	D	L	L	T	D	S	G	T	G	A	V	T	Q	S	M	Q	A	A	M	M	.	.	.	R	G	D	E	A	Y	S	G	S	R	S	Y	Y	A	L	A
Query Conservation																																																															.	.	.
Alig confidence					.																																						.	.	.	.	.	.	.	.	.	.	.										.	.	.
Template Conservation					.																																						.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	Y	P	.	V	A	V	R	G	E	G	V	F	L	Y	D	D	A	G	R	R	Y	L	D	G	S	S	G	A	L	V	A	N	I	G	H	G	R	A	E	V	.	.	.	.	.	.	.	.	.	.	.	G	E	R	M	A	A	Q	A	A	R	L	P	F	V	H	G	S	Q	F	S	S	D	V	L	E	E	Y	A
Template Known Secondary structure					.							B	T					T	T							T	T					T		T	T		B						.	.	.	.	.	.	.	.	.	.	.																T	T	T
Template Predicted Secondary structure					.																																						.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		11	.	.		.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50												.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.			.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure												.	.
Query SS confidence												.	.
Query Sequence		E	S	V	K	N	I	F	G	Y	Q	.	.	Y	T	I	P	T	H	Q	G	R	G	A	E	Q	I	Y	I	P	V	L	I	K	K	R	E	Q	E	K	G	L	D	R	S	K	M	V	A	F	S	N	Y	F	F	D	T	T	Q	G	H	S	Q	I	N	G	C	T	V	R	N	V	Y	I	K	E	A	F	D	T	G
Query Conservation												.	.
Alig confidence												.	.																																																																.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		G	R	L	A	R	F	V	G	L	P	T	F	R	F	W	A	V	S	G	G	S	E	A	T	E	S	A	V	K	L	A	R	Q	Y	H	V	E	R	G	E	P	G	R	F	K	V	I	T	R	V	P	S	R	E	L	Y	T	P	L	M	R	P	E	A	W	P	K	L	P	K	P	D	P	A	R	.	.	.	.	.
Template Known Secondary structure								T	T		T	T							S	S																			T	T		T	T								T	T			T	T	T	G	G	G	G	S	G	G	G									T	T	S	.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200		.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure																																								.
Query SS confidence																																								.
Query Sequence		V	R	Y	D	F	K	G	N	F	D	L	E	G	L	E	R	G	I	E	E	V	G	P	N	N	V	P	Y	I	V	A	T	I	T	S	N	S	A	.	G	G	Q	P	V	S	L	A	N	L	K	A	M	Y	S	I	A	K	K	Y	D	I	P	V	V	M	D	S	A	R	F	A	E	N	A	Y	F	I	K	Q	R
Query Conservation																																								.
Alig confidence		.	.	.	.	.																																		.																																.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.																																																																		.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	N	G	A	E	D	A	E	G	L	R	A	L	L	E	R	E	G	P	E	T	V	A	A	F	M	A	E	P	V	V	G	A	S	D	A	A	L	A	P	A	P	G	Y	Y	E	R	V	R	D	I	C	D	E	A	G	I	I	F	I	A	D	E	V	M	S	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.							T											G	G	G								S	S			G	G	G	T	T					T	T													T								T	T	T	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.																																																																		.	.	.	.	.	.	.	.	.	.
Template SS confidence
							171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.		.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		E	A	E	Y	K	D	W	T	I	E	Q	I	T	R	E	T	Y	.	K	Y	A	D	M	L	A	M	S	A	K	K	D	A	M	V	P	M	G	G	L	L	C	M	K	D	D	S	F	F	D	V	Y	T	E	C	R	T	L	C	V	V	Q	E	G	F	P	T	Y	G	G	L	E	G	G	A	M	E	R	L	A	V
Query Conservation																			.
Alig confidence		.	.																.																																								.	.	.	.	.	.	.	.
Template Conservation		.	.																																																								.	.	.	.	.	.	.	.
Template Sequence		.	.	G	M	G	R	C	G	S	P	L	A	L	S	R	W	S	G	V	T	P	D	I	A	V	L	G	K	G	L	A	A	G	Y	A	P	L	A	G	L	L	A	A	P	Q	V	Y	E	T	V	M	G	G	F	M	H	G	.	.	.	.	.	.	.	.	F	T	Y	A	G	H	P	V	S	V	A	A	G	L	S
Template Known Secondary structure		.	.	T	T	T	T	T	S	S	S	S	G	G	G	G	T	T	T				S						G	G	G	T	T	T	S	S																							.	.	.	.	.	.	.	.		T	T	T	T
Template Predicted Secondary structure		.	.																																																								.	.	.	.	.	.	.	.
Template SS confidence
				236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290									.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.						.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.
Query SS confidence																																		.	.	.	.	.
Query Sequence		G	L	Y	D	G	M	N	L	D	W	L	A	Y	R	I	A	Q	V	Q	Y	L	V	D	G	L	E	E	I	G	V	V	C	.	.	.	.	.	Q	Q	A	G	G	H	A	A	F	V	D	A	G	K	L	L	P	H	I	P	A	D	Q	F	P	A	Q	A	L	A	C	E	L	Y	K	V	A	G	I	R	A	V	E
Query Conservation																																		.	.	.	.	.
Alig confidence																																		.	.	.	.	.															.	.	.	.	.	.	.	.	.																			.	.
Template Conservation																																																					.	.	.	.	.	.	.	.	.																			.	.
Template Sequence		V	L	D	I	V	E	R	E	D	L	T	G	A	A	K	E	R	G	A	Q	L	L	A	G	L	Q	A	L	Q	A	R	F	P	Q	M	M	Q	V	R	G	T	G	L	L	L	G	V	V	L	G	D	.	.	.	.	.	.	.	.	.	L	I	A	S	R	I	G	A	A	A	L	K	R	G	L	I	T	Y	.	.
Template Known Secondary structure									T	T																								T	T								T	T									.	.	.	.	.	.	.	.	.														T	B				.	.
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.																			.	.
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.										360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	S	F	L	L	G	R	D	P	K	T	G	K	Q	L	P	C	P	A	E	L	L	R	L	T	I	P	R	A	T	Y	T	Q	T	H	M	D	F	I	I	E	A	F	K	H	V	K	E	N	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	H	L	L	L	G	.	P	P	L	S	I	T	A	A	E	V	D	G	L	L	A	L	L	A	G	A	L	E	D	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.			T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Template SS confidence
																						399	400	.	.	.	.		.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.