Job Description P0A853 Confidence 99.88% Date Thu Jan 5 11:06:55 GMT 2012 Rank 141 Aligned Residues 328 % Identity 10% Template c3getA_ PDB info PDB header:transferase Chain: A: PDB Molecule:histidinol-phosphate aminotransferase; PDBTitle: crystal structure of putative histidinol-phosphate aminotransferase2 (np_281508.1) from campylobacter jejuni at 2.01 a resolution Resolution 2.01 Å

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		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.			.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.			.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure																							.	.																											.	.
Query SS confidence																							.	.																											.	.
Query Sequence		I	D	L	L	T	D	S	G	T	G	A	V	T	Q	S	M	Q	A	A	M	M	.	.	R	G	D	E	A	Y	S	G	S	R	S	Y	Y	A	L	A	E	S	V	K	N	I	F	G	Y	Q	.	.	Y	T	I	P	T	H	Q	G	R	G	A	E	Q	I	Y	I	P	V	L	I	K	K	R	E	Q	E	K	G	L
Query Conservation																							.	.																											.	.
Alig confidence																							.	.																											.	.
Template Conservation
Template Sequence		I	K	L	A	S	N	E	N	P	F	G	T	P	P	K	A	I	E	C	L	R	Q	N	A	N	K	A	H	L	Y	P	D	D	S	X	I	E	L	K	S	T	L	A	Q	K	Y	K	V	Q	N	E	N	I	I	I	G	A	G	S	D	Q	V	I	E	F	A	I	H	S	K	L	N	S	K	N	A	F	L	Q	A
Template Known Secondary structure					S	S				T	T		S												G	G	G	T	T	S				T	T													T			G	G	G					S	S															T	T
Template Predicted Secondary structure
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	R	S	K	M	V	A	F	S	N	Y	F	F	D	T	T	Q	G	H	S	Q	I	N	G	C	T	V	R	N	V	Y	I	K	E	A	F	D	T	G	V	R	Y	D	F	K	G	N	F	D	L	E	G	L	E	R	G	I	E	E	V	G	P	N	N	V	P	Y	I	V	A	T	I	T	S	N	S	A	G	G	Q
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.																.	.	.	.															.
Template Conservation				.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.																.	.	.	.															.
Template Sequence		G	V	.	.	.	.	.	.	.	.	.	T	F	A	X	Y	E	I	Y	A	K	Q	C	G	A	K	C	Y	K	T	Q	S	I	T	.	.	.	.	.	.	.	.	.	.	H	N	L	D	E	F	K	K	L	Y	E	T	H	K	D	.	.	.	.	E	I	K	L	I	F	L	C	L	P	N	N	P	L	.	G	E
Template Known Secondary structure		S	S	.	.	.	.	.	.	.	.	.			T										T							S	S	S	S	.	.	.	.	.	.	.	.	.	.													T	T	T	.	.	.	.	T								S	S		T	T	T	.
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.																.	.	.	.															.
Template SS confidence
		112	.										.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.											.	.	.	140	.	.	.	.	.	.	.	.	.	150	.					.	.	.	.	.	.	.	.	160	.	.	.	.	.		.	.
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	S	L	A	N	L	K	A	M	Y	S	I	A	K	K	Y	D	I	P	V	V	M	D	S	A	R	F	A	E	N	A	Y	F	I	K	Q	R	E	A	E	Y	K	D	W	T	I	E	Q	I	T	R	E	T	Y	K	Y	A	D	M	L	A	M	S	A	K	K	D	A	M	V	P	M	G	G	L	L	C	M	K
Query Conservation
Alig confidence																				.															.	.	.	.	.	.	.
Template Conservation																				.															.	.	.	.	.	.	.
Template Sequence		C	L	D	A	S	E	A	T	E	F	I	K	G	V	N	E	D	C	.	L	V	V	I	D	A	A	Y	N	E	F	A	S	F	.	.	.	.	.	.	.	K	D	S	K	K	H	L	E	P	C	E	L	I	K	E	F	D	N	V	L	Y	L	G	T	F	S	L	Y	G	L	G	G	L	R	I	G	Y	G	I	A
Template Known Secondary structure														T	S		T	T	S	.							T	T							.	.	.	.	.	.	.			G	G	G												T	T											S		T	T	T
Template Predicted Secondary structure																				.															.	.	.	.	.	.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.		.	.	.	.	190	.	.	.	.	.	.	.	.	.								200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	D	S	F	F	D	V	Y	T	E	C	R	T	L	C	V	V	Q	E	G	F	P	T	Y	G	G	L	E	G	G	A	M	E	R	L	A	V	G	L	Y	D	G	M	N	L	D	W	L	A	Y	R	I	A	Q	V	Q	Y	L	V	D	G	L	E	E	I	G	V	V	C	Q	Q	A	G	G	H	A	A	F	V	D
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.
Template Sequence		N	A	N	I	I	S	A	F	Y	K	L	R	A	.	.	.	.	.	.	.	.	.	P	F	N	V	S	N	L	A	L	K	A	A	V	A	A	X	D	D	D	E	F	T	E	K	T	L	E	N	N	F	S	Q	X	E	L	Y	K	E	F	A	K	K	H	N	I	K	I	I	D	S	Y	T	N	F	I	T	Y	F
Template Known Secondary structure													S		.	.	.	.	.	.	.	.	.	T	T		S													T																										T	T							S	S	S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.										.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		364	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	K	L	L	P	H	I	P	A	D	Q	F	P	A	Q	A	L	A	C	E	L	Y	K	V	A	G	I	R	A	V	E	I	G	S	F	L	L	G	R	D	P	K	T	G	K	Q	L	P	C	P	A	E	L	L	R	L	T	I	P	R	A	T	Y	T	Q	T	H	M	D	F	I	I	E	A	F	K	H	V	K
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	D	E	K	N	S	T	D	L	S	E	K	L	L	K	K	G	I	I	I	R	N	L	K	S	Y	G	L	N	A	I	R	I	T	I	G	.	.	.	.	T	S	Y	E	N	E	K	F	F	T	E	F	D	K	I	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S	S											T	T	T							G	G	G	T		S								.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.
Template SS confidence
																										312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.					.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
		444
Predicted Secondary structure
Query SS confidence
Query Sequence		E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		364

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions