Job Description P0A853 Confidence 99.86% Date Thu Jan 5 11:06:55 GMT 2012 Rank 173 Aligned Residues 326 % Identity 13% Template c3ftbA_ PDB info PDB header:transferase Chain: A: PDB Molecule:histidinol-phosphate aminotransferase; PDBTitle: the crystal structure of the histidinol-phosphate2 aminotransferase from clostridium acetobutylicum Resolution 2.00 Å

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		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.			.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.			.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure																							.	.																											.	.
Query SS confidence																							.	.																											.	.
Query Sequence		I	D	L	L	T	D	S	G	T	G	A	V	T	Q	S	M	Q	A	A	M	M	.	.	R	G	D	E	A	Y	S	G	S	R	S	Y	Y	A	L	A	E	S	V	K	N	I	F	G	Y	Q	.	.	Y	T	I	P	T	H	Q	G	R	G	A	E	Q	I	Y	I	P	V	L	I	K	K	R	E	Q	E	K	G	L
Query Conservation																							.	.																											.	.
Alig confidence																							.	.																											.	.																		.	.	.	.
Template Conservation																																																																						.	.	.	.
Template Sequence		L	D	Y	S	S	N	I	N	P	L	G	I	P	K	S	F	L	N	N	I	D	E	G	I	K	N	L	G	V	Y	P	D	V	N	Y	R	R	L	N	K	S	I	E	N	Y	L	K	L	K	D	I	G	I	V	L	G	N	G	A	S	E	I	I	E	L	S	I	S	.	.	.	.	L	F	E	K	I	L	I	I
Template Known Secondary structure				T	T					T	T		S						T	T							G	G	G	S				T	T													T			S							S	S										T	.	.	.	.	T		S
Template Predicted Secondary structure																																																																						.	.	.	.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.					.	.	.	100	.	.	.	.
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	R	S	K	M	V	A	F	S	N	Y	F	F	D	T	T	Q	G	H	S	Q	I	N	G	C	T	V	R	N	V	Y	I	K	E	A	F	D	T	G	V	R	Y	D	F	K	G	N	F	D	L	E	G	L	E	R	G	I	E	E	V	G	P	N	N	V	P	Y	I	V	A	T	I	T	S	N	S	A	G	G	Q
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.															.	.	.	.	.															.
Template Conservation				.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.															.	.	.	.	.															.
Template Sequence		V	P	.	.	.	.	.	.	.	.	.	S	Y	A	E	Y	E	I	N	A	K	K	H	G	V	S	V	V	F	S	Y	L	D	E	.	.	.	.	.	.	.	.	.	.	N	M	C	I	D	Y	E	D	I	I	S	K	I	D	.	.	.	.	.	D	V	D	S	V	I	I	G	N	P	N	N	P	N	.	G	G
Template Known Secondary structure			S	.	.	.	.	.	.	.	.	.			T									T	T										T	.	.	.	.	.	.	.	.	.	.	T	S											T	T	.	.	.	.	.	T		S						T	T	B	T	T	T	.	T	B
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.															.	.	.	.	.															.
Template SS confidence
		105	.										.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.											130	.	.	.	.	.	.	.	.	.	140	.	.	.						.	.	.	.	.	.	150	.	.	.	.	.	.	.		.	.
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	S	L	A	N	L	K	A	M	Y	S	I	A	K	K	Y	D	I	P	V	V	M	D	S	A	R	F	A	E	N	A	Y	F	I	K	Q	R	E	A	E	Y	K	D	W	T	I	E	Q	I	T	R	E	T	Y	K	Y	A	D	M	L	A	M	S	A	K	K	D	A	M	V	P	M	G	G	L	L	C	M	K
Query Conservation
Alig confidence																															.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.
Template Sequence		L	I	N	K	E	K	F	I	H	V	L	K	L	A	E	E	K	K	K	T	I	I	I	D	E	A	F	I	E	.	.	.	.	.	.	.	.	.	F	T	G	D	P	S	S	S	F	V	G	E	I	K	N	Y	S	C	L	F	I	I	R	A	M	T	K	F	F	A	M	P	G	I	R	F	G	Y	G	I	T	N
Template Known Secondary structure																			T								S	S	G	G	.	.	.	.	.	.	.	.	.	G	T			T	T	S	S	S	G	G	G	T	T	T		S	S							S	S	S	T	T	S		G	G	G								S
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.										.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.			.	.	.	.	.	.	360	.
Predicted Secondary structure																																																																								.	.
Query SS confidence																																																																								.	.
Query Sequence		D	D	S	F	F	D	V	Y	T	E	C	R	T	L	C	V	V	Q	E	G	F	P	T	Y	G	G	L	E	G	G	A	M	E	R	L	A	V	G	L	Y	D	G	M	N	L	D	W	L	A	Y	R	I	A	Q	V	Q	Y	L	V	D	G	L	E	E	I	G	V	V	C	Q	.	.	Q	A	G	G	H	A	A	F
Query Conservation																																																																								.	.
Alig confidence															.	.	.	.	.	.	.	.	.																																																	.	.
Template Conservation															.	.	.	.	.	.	.	.	.
Template Sequence		N	K	E	I	A	A	K	I	K	A	K	Q	N	.	.	.	.	.	.	.	.	.	P	W	N	I	N	C	F	A	E	M	A	A	I	N	C	L	K	D	T	N	Y	I	E	E	S	L	L	W	I	K	K	E	R	K	R	F	I	E	E	L	N	K	I	G	F	I	K	R	V	F	S	P	H	A	N	F	V	L
Template Known Secondary structure											T	T	S		.	.	.	.	.	.	.	.	.	T	T		S											T	S	S																										S	S	S								S	S	S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.										.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	A	G	K	L	L	P	H	I	P	A	D	Q	F	P	A	Q	A	L	A	C	E	L	Y	K	V	A	G	I	R	A	V	E	I	G	S	F	L	L	G	R	D	P	K	T	G	K	Q	L	P	C	P	A	E	L	L	R	L	T	I	P	R	A	T	Y	T	Q	T	H	M	D	F	I	I	E	A	F	K	H
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.														.											.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.														.											.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Template Sequence		C	R	L	E	N	.	.	.	.	.	.	.	.	.	I	S	G	E	K	L	Y	D	S	L	L	K	E	.	D	I	V	I	R	R	C	C	N	F	.	.	.	.	.	.	.	.	.	.	.	I	G	L	D	D	S	F	V	R	F	A	I	K	.	.	.	.	D	E	K	K	N	T	K	F	L	R	A	L	K	G
Template Known Secondary structure					S	S	.	.	.	.	.	.	.	.	.	S											T	T	.	T							T	T	S	.	.	.	.	.	.	.	.	.	.	.	T	T			T	T								.	.	.	.
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.														.											.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Template SS confidence
		302	.	.	.	.										.	.	.	310	.	.	.	.	.	.	.	.	.		320	.	.	.	.	.	.	.	.	.												330	.	.	.	.	.	.	.	.	.	340	.	.					.	.	.	.	.	.	.	350	.	.	.	.	.	.
		442	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	E	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	E	N	N
Template Known Secondary structure					T
Template Predicted Secondary structure
Template SS confidence
		357	.	.	360

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions