Job Description P0A853 Confidence 99.94% Date Thu Jan 5 11:06:55 GMT 2012 Rank 84 Aligned Residues 344 % Identity 13% Template c3frkB_ PDB info PDB header:transferase Chain: B: PDB Molecule:qdtb; PDBTitle: x-ray structure of qdtb from t. thermosaccharolyticum in2 complex with a plp:tdp-3-aminoquinovose aldimine Resolution 2.15 Å

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		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.			.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.
Predicted Secondary structure																									.	.																																														.
Query SS confidence																									.	.																																														.
Query Sequence		V	F	I	D	L	L	T	D	S	G	T	G	A	V	T	Q	S	M	Q	A	A	M	M	.	.	R	G	D	E	A	Y	S	G	S	R	S	Y	Y	A	L	A	E	S	V	K	N	I	F	G	Y	Q	Y	T	I	P	T	H	Q	G	R	G	A	E	Q	I	Y	I	P	V	L	.	I	K	K	R	E	Q	E	K	G
Query Conservation																									.	.																																														.
Alig confidence										.	.														.	.																																														.
Template Conservation										.	.
Template Sequence		S	F	A	S	F	K	P	M	.	.	H	D	E	I	E	Y	E	I	K	F	K	F	E	E	I	Y	K	R	N	W	F	I	L	G	D	E	D	K	K	F	E	Q	E	F	A	D	Y	C	N	V	N	Y	C	I	G	C	G	N	G	L	D	A	L	H	L	I	L	K	G	Y	D	I	G	F	G	D	E	V	I	V
Template Known Secondary structure			S							.	.																			T			S	S															T	T	S	S						S													T	T			T	T
Template Predicted Secondary structure										.	.
Template SS confidence
		4	.	.	.	.	.	10	.			.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	R	S	K	M	V	A	F	S	N	Y	F	F	D	T	T	Q	G	H	S	Q	I	N	G	C	T	V	R	N	V	Y	I	K	E	A	F	D	T	G	V	R	Y	D	F	K	G	N	F	D	L	E	G	L	E	R	G	I	E	E	V	G	P	N	N	V	P	Y	I	V	A	T	I	T	S	N	S	A	G	G
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.
Template Conservation								.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.
Template Sequence		P	S	N	T	F	I	.	.	.	.	.	.	.	.	.	A	T	A	L	A	V	S	Y	T	G	A	K	P	I	F	V	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	D	I	R	T	Y	N	I	D	P	S	L	I	E	S	A	I	T	E	K	T	K	A	I	I	A	V	H	L	Y	G	.
Template Known Secondary structure			T	T	S			.	.	.	.	.	.	.	.	.									T	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T	T	T				G	G	G	T	G	G	G			T	T									G	G	G	.
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.
Template SS confidence
		82	.	.	.	.	.										.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.																	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.		.	.	.	280	.
Predicted Secondary structure																																																																												.
Query SS confidence																																																																												.
Query Sequence		Q	P	V	S	L	A	N	L	K	A	M	Y	S	I	A	K	K	Y	D	I	P	V	V	M	D	S	A	R	F	A	E	N	A	Y	F	I	K	Q	R	E	A	E	Y	K	D	W	T	I	E	Q	I	T	R	E	T	Y	K	Y	A	D	M	L	A	M	S	A	K	K	D	A	M	V	P	M	.	G	G	L	L	C
Query Conservation																																																																												.
Alig confidence		.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Conservation		.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	Q	P	A	D	M	D	E	I	K	R	I	A	K	K	Y	N	L	K	L	I	E	D	A	A	Q	A	H	G	S	L	Y	K	G	M	K	V	G	S	L	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	G	F	S	F	Y	P	A	K	N	L	G	S	L	G	D	G	G	A	V	V
Template Known Secondary structure		.	.	.	S														T	T								T	T		T	T				T	T			T	T	S	S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T	S	T	T			S	S
Template Predicted Secondary structure		.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
					136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.															.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.			.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.
Query SS confidence																																		.	.
Query Sequence		M	K	D	D	S	F	F	D	V	Y	T	E	C	R	T	L	C	V	V	Q	E	G	F	P	T	Y	G	G	L	E	G	G	.	.	A	M	E	R	L	A	V	G	L	Y	D	G	M	N	L	D	W	L	A	Y	R	I	A	Q	V	Q	Y	L	V	D	G	L	E	E	I	G	V	V	C	Q	Q	A	G	G	H	A
Query Conservation																																		.	.
Alig confidence																																		.	.
Template Conservation
Template Sequence		T	N	D	K	D	L	A	E	K	I	K	A	L	S	N	Y	G	S	E	K	K	Y	H	H	I	Y	K	G	F	N	S	R	L	D	E	L	Q	A	G	F	L	R	V	K	L	K	Y	L	D	K	W	N	E	E	R	R	K	I	A	Q	K	Y	I	A	G	I	N	N	P	N	V	I	I	P	V	E	A	D	Y	A
Template Known Secondary structure			S													B	T	T		S	B	T	T	B			S				B																																						B	T	T	B	B						T	T
Template Predicted Secondary structure
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.											.	.	420	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.	.	.	.	.
Query Sequence		A	F	V	D	A	G	K	L	L	P	H	I	P	A	D	Q	F	P	A	Q	A	L	A	C	E	L	Y	K	V	A	G	I	R	A	V	E	I	G	S	F	L	L	G	R	D	P	K	T	G	K	Q	L	P	C	P	A	E	L	.	.	.	.	.	.	.	.	.	.	L	R	L	T	I	P	R	A	T	Y	T	Q
Query Conservation																																																												.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.																			.																																.	.	.	.	.	.	.	.	.	.						.
Template Conservation					.	.	.	.	.																			.																																															.
Template Sequence		K	H	V	.	.	.	.	.	W	Y	T	F	V	I	R	S	E	K	R	D	E	L	Q	K	Y	L	.	N	N	N	G	I	G	T	L	I	H	Y	P	I	P	I	H	L	Q	Q	A	Y	K	D	L	G	F	K	T	G	N	F	P	I	A	E	K	I	A	N	E	I	L	S	I	P	I	.	W	Y	G	M	K	N
Template Known Secondary structure					.	.	.	.	.		S							T	T									.			T	T	B			B		S		S	S		G	G	G	S	G	G	G	G	G	G				T	T	S	S																.		T	T
Template Predicted Secondary structure					.	.	.	.	.																			.																																															.
Template SS confidence
		279	280	.						.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.		.	.	.	.	350	.
		430	.	.	.	.	.	.	.	.	.	440	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	H	M	D	F	I	I	E	A	F	K	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	E	I	E	Y	V	I	D	K	I	N	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		352	.	.	.	.	.	.	.	360	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions