Job Description P0A853 Confidence 99.80% Date Thu Jan 5 11:06:55 GMT 2012 Rank 205 Aligned Residues 323 % Identity 13% Template c3ffrA_ PDB info PDB header:transferase Chain: A: PDB Molecule:phosphoserine aminotransferase serc; PDBTitle: crystal structure of a phosphoserine aminotransferase serc (chu_0995)2 from cytophaga hutchinsonii atcc 33406 at 1.75 a resolution Resolution 1.75 Å

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		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.										.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.				.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.																		.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.																		.	.	.
Query Sequence		G	T	G	A	V	T	Q	S	M	Q	A	A	M	M	R	G	D	E	A	Y	S	G	S	.	.	.	.	.	.	.	.	.	R	S	Y	Y	A	L	A	E	S	V	K	N	I	F	G	Y	Q	.	.	.	Y	T	I	P	T	H	Q	G	R	G	A	E	Q	I	Y	I	P	V	L	I	K	K	R	E	Q	E	K	G
Query Conservation																									.	.	.	.	.	.	.	.	.																		.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.																		.	.	.
Template Conservation
Template Sequence		G	P	S	E	L	Y	P	T	V	R	Q	H	X	I	T	A	L	D	E	K	I	G	V	I	S	H	R	S	K	K	F	E	E	V	Y	K	T	A	S	D	N	L	K	T	L	L	E	L	P	S	N	Y	E	V	L	F	L	A	S	A	T	E	I	W	E	R	I	I	Q	N	C	V	E	K	K	S	F	H	C	V
Template Known Secondary structure		S	S					T	T											T	T	T	T	T	S		T	T	S																		T	T			T	T							S															S	S
Template Predicted Secondary structure
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	R	S	K	M	V	A	F	S	N	Y	F	F	D	T	T	Q	G	H	S	Q	I	N	G	C	T	V	R	N	V	Y	I	K	E	A	F	D	T	G	V	R	Y	D	F	K	G	N	F	D	L	E	G	L	E	R	G	I	E	E	V	G	P	N	N	V	P	Y	I	V	A	T	I	T	S	N	S	A	G	G
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.
Template Sequence		N	G	S	.	.	.	.	.	.	.	.	.	F	S	K	R	F	Y	E	F	A	G	E	L	G	R	E	A	Y	K	E	E	A	A	F	.	.	.	.	.	.	.	.	.	.	G	K	G	F	Y	P	A	D	I	T	.	.	.	.	.	.	V	P	A	D	A	E	I	I	C	L	T	H	N	E	T	S	S	G	V
Template Known Secondary structure			S		.	.	.	.	.	.	.	.	.												T	T										T	.	.	.	.	.	.	.	.	.	.	T					G	G	G			.	.	.	.	.	.			T	T								S			T	T	T	T
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.
Template SS confidence
		90	.	.										.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.											.	.	.	.	120	.	.	.	.	.							.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	P	V	S	L	A	N	L	K	A	M	Y	S	I	A	K	K	Y	D	I	P	V	V	M	D	S	A	R	F	A	E	N	A	Y	F	I	K	Q	R	E	A	E	Y	K	D	W	T	I	E	Q	I	T	R	E	T	Y	K	Y	A	D	M	L	A	M	S	A	K	K	D	A	M	V	P	M	G	G	L	L	C	M
Query Conservation
Alig confidence					.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	X	P	.	.	.	.	V	E	D	I	N	T	F	R	D	K	N	K	D	A	L	I	F	V	D	A	V	S	S	L	P	Y	P	K	F	D	W	T	K	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	S	V	F	F	S	V	Q	C	F	G	L	P	A	G	L	G	V	W	I	L
Template Known Secondary structure					.	.	.	.					T	T	S	G	G	G	S	T	T	S							T	T	T	T	T	S	S				T	T	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S													S
Template Predicted Secondary structure					.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		145	.	.					.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.																			.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.													.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.				.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.
Query Sequence		K	D	D	S	F	F	D	V	Y	T	E	C	R	T	L	C	V	V	Q	E	G	.	.	.	.	.	.	.	.	.	.	.	.	F	P	T	Y	G	G	L	E	G	G	A	M	E	R	L	A	V	G	L	Y	D	G	M	N	.	.	.	L	D	W	L	A	Y	R	I	A	Q	V	Q	Y	L	V	D	G	L	E	E
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.
Template Conservation
Template Sequence		N	D	R	V	I	E	K	S	K	A	L	L	A	K	R	K	S	I	G	T	Y	H	T	I	P	S	X	L	E	K	A	R	V	N	Q	T	P	E	T	P	N	A	X	N	I	F	L	L	G	K	V	T	G	D	X	L	Q	I	S	A	D	G	I	R	K	Q	T	E	E	K	A	A	L	I	N	T	Y	I	E	S
Template Known Secondary structure															T	T					S	T	T	S									T	T	T			S	S
Template Predicted Secondary structure
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	V	V	C	Q	Q	A	G	G	H	A	A	F	V	D	A	G	K	L	L	P	H	I	P	A	D	Q	F	P	A	Q	A	L	A	C	E	L	Y	K	V	A	G	I	R	A	V	E	I	G	S	F	L	L	G	R	D	P	K	T	G	K	Q	L	P	C	P	A	E	L	L	R	L	T	I	P	R	A	T	Y
Query Conservation
Alig confidence													.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template Conservation													.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template Sequence		S	K	V	F	S	F	G	V	E	D	A	.	.	.	.	.	K	L	R	S	X	T	T	I	V	A	N	T	T	X	L	P	G	E	I	N	K	I	L	E	P	F	D	X	A	V	G	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	Y	G	S	K	K	E	T	Q	I	R	I	A	.	N	F	P	A	H
Template Known Secondary structure			S	S				S	S	S		G	.	.	.	.	.	G	G	B		S	S							S	S										G	G	G	T					.	.	.	.	.	.	.	.	.	.	.	.	.			S	G	G	G	T	T	T						.			T	T	S
Template Predicted Secondary structure													.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.						.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.														.	.	.	.	330	.	.	.	.	.	.	.	.	.		340	.	.	.	.
		428	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Q	T	H	M	D	F	I	I	E	A	F	K	H	V	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	L	E	Q	V	H	K	L	V	Q	T	L	K	E	K	I
Template Known Secondary structure																	T
Template Predicted Secondary structure
Template SS confidence
		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions