Job Description P0A853 Confidence 99.86% Date Thu Jan 5 11:06:55 GMT 2012 Rank 171 Aligned Residues 301 % Identity 15% Template c3e6gA_ PDB info PDB header:lyase Chain: A: PDB Molecule:cystathionine gamma-lyase-like protein; PDBTitle: crystal structure of xometc, a cystathionine c-lyase-like2 protein from xanthomonas oryzae pv.oryzae Resolution 2.80 Å

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		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.					.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																																																																				.	.	.	.
Query SS confidence																																																																				.	.	.	.
Query Sequence		G	S	R	S	Y	Y	A	L	A	E	S	V	K	N	I	F	G	Y	Q	Y	T	I	P	T	H	Q	G	R	G	A	E	Q	I	Y	I	P	V	L	I	K	K	R	E	Q	E	K	G	L	D	R	S	K	M	V	A	F	S	N	Y	F	F	D	T	T	Q	G	.	.	.	.	H	S	Q	I	N	G	C	T	V	R
Query Conservation																																																																				.	.	.	.
Alig confidence																																					.																.	.	.	.	.	.	.	.								.	.	.	.
Template Conservation																																					.																.	.	.	.	.	.	.	.
Template Sequence		H	N	P	T	R	F	A	Y	E	R	C	V	A	A	L	E	G	G	T	R	A	F	A	F	A	S	G	M	A	A	T	S	T	V	M	.	E	L	L	D	A	G	S	H	V	V	A	M	D	D	L	.	.	.	.	.	.	.	.	Y	G	G	T	F	R	L	F	E	R	V	R	R	R	T	A	G	L	D	F	S
Template Known Secondary structure																		T		S						S	S										.	T	T	S		T	T							S	S		.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																					.																.	.	.	.	.	.	.	.
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.									.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	Y	I	K	E	A	F	D	T	G	V	R	Y	D	F	K	G	N	F	D	L	E	G	L	E	R	G	I	E	E	V	G	P	N	N	V	P	Y	I	V	A	T	I	T	S	N	S	A	G	G	Q	P	V	S	L	A	N	L	K	A	M	Y	S	I	A	K	K	Y	D	I	P	V	V	M	D	S	A	R	F
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.																.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.																.	.	.	.
Template Sequence		F	V	D	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	P	A	A	F	K	A	A	I	R	A	.	.	.	.	D	T	K	M	V	W	I	E	T	P	T	N	P	M	L	.	.	.	.	K	L	V	D	I	A	A	I	A	V	I	A	R	K	H	G	L	L	T	V	V	D	N	T	F	A
Template Known Secondary structure					T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	.	.	.	.	T								S	S		T	T	T		.	.	.	.															T	T								S	S	S
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.																.	.	.	.
Template SS confidence
		133	.	.	.	.																.	.	140	.	.	.	.	.	.	.	.					.	150	.	.	.	.	.	.	.	.	.	160	.	.	.					.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.					.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.
Query SS confidence																																															.	.	.	.
Query Sequence		A	E	N	A	Y	F	I	K	Q	R	E	A	E	Y	K	D	W	T	I	E	Q	I	T	R	E	T	Y	K	Y	A	D	M	L	A	M	S	A	K	K	D	A	M	V	P	M	.	.	.	.	G	G	L	L	C	M	K	D	D	S	F	F	D	V	Y	T	E	C	R	T	L	C	V	V	Q	E	G	F	P	T	Y
Query Conservation																																															.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.																	.	.	.	.																						.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.																																										.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	S	P	M	L	Q	R	P	L	S	L	G	.	.	.	.	.	.	A	D	L	V	V	H	S	A	T	K	Y	L	N	G	H	S	D	M	V	G	G	I	A	V	V	G	D	N	A	E	L	A	E	Q	M	A	F	L	Q	N	S	.	.	.	.	.	.	.	.	I	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.		T	T	T			G	G	G	G	T	.	.	.	.	.	.		S						T	T	T	T	T	T		S	S	S										S															.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.																																										.	.	.	.	.	.	.	.
Template SS confidence
														190	.	.	.	.	.	.	.	.	.	200							.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.									.	.
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.								350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
Predicted Secondary structure																																												.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.
Query Sequence		G	G	L	E	G	G	A	M	E	R	L	A	V	G	L	Y	D	G	M	N	L	D	W	L	A	Y	R	I	A	Q	V	Q	Y	L	V	D	G	L	E	E	I	G	.	.	.	.	.	.	.	V	V	C	Q	Q	A	G	G	H	A	A	F	V	D	A	G	K	L	L	P	H	I	P	A	D	Q	F	P	A	Q	A
Query Conservation																																												.	.	.	.	.	.	.
Alig confidence																				.	.																							.	.	.	.	.	.	.
Template Conservation																				.	.
Template Sequence		G	V	Q	G	P	F	D	S	F	L	A	L	R	G	L	K	T	L	.	.	P	L	R	M	R	A	H	C	E	N	A	L	A	L	A	Q	W	L	E	T	H	P	A	I	E	K	V	I	Y	P	G	L	A	S	H	P	Q	H	V	L	A	K	R	Q	M	S	G	F	G	G	I	V	S	I	V	L	K	G	G	F
Template Known Secondary structure			B														T	T		.	.																				T		T	T							T	T	S	T	T	S	T	T									S	S			S							T	T
Template Predicted Secondary structure																				.	.
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.			.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		381	.	.	.	.	.	.	.	.												390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.				.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.																											.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.																											.	.	.
Query Sequence		L	A	C	E	L	Y	K	V	A	.	.	.	.	.	.	.	.	.	.	.	G	I	R	A	V	E	I	G	S	F	L	L	G	R	D	P	K	T	G	K	Q	L	P	C	P	A	.	.	.	E	L	L	R	L	T	I	P	R	A	T	Y	T	Q	T	H	M	D	F	I	I	E	A	F	K	H
Query Conservation											.	.	.	.	.	.	.	.	.	.	.																											.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.																											.	.	.										.	.	.	.	.
Template Conservation																																																												.	.	.	.	.
Template Sequence		D	A	A	K	R	F	C	E	K	T	E	L	F	T	L	A	E	S	L	G	G	V	E	S	L	V	N	H	P	A	V	M	T	H	A	S	I	P	V	A	R	R	E	Q	L	G	I	S	D	A	L	V	R	L	S	V	G	I	.	.	.	.	.	E	D	L	G	D	L	R	G	D	L	E	R
Template Known Secondary structure												S	S	S				S					S	S						T	T	T	T	T	T		S	S			T	T	T	T	T	S	S			S	S								S	.	.	.	.	.	S										T	T
Template Predicted Secondary structure																																																												.	.	.	.	.
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.						380	.	.	.	.	.	.	.	.	.	390	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions