Job Description P0A853 Confidence 99.93% Date Thu Jan 5 11:06:55 GMT 2012 Rank 97 Aligned Residues 324 % Identity 16% Template c3dr4B_ PDB info PDB header:transferase Chain: B: PDB Molecule:putative perosamine synthetase; PDBTitle: gdp-perosamine synthase k186a mutant from caulobacter2 crescentus with bound sugar ligand Resolution 1.60 Å

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		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.
Query SS confidence																																																							.
Query Sequence		Q	S	M	Q	A	A	M	M	R	G	D	E	A	Y	S	G	S	R	S	Y	Y	A	L	A	E	S	V	K	N	I	F	G	Y	Q	Y	T	I	P	T	H	Q	G	R	G	A	E	Q	I	Y	I	P	V	L	.	I	K	K	R	E	Q	E	K	G	L	D	R	S	K	M	V	A	F	S	N	Y	F	F	D	T	T
Query Conservation																																																							.
Alig confidence													.																																										.													.	.	.	.	.	.	.	.	.
Template Conservation													.																																																							.	.	.	.	.	.	.	.	.
Template Sequence		D	Y	V	L	E	C	M	D	T	T	W	.	I	S	S	V	G	R	F	I	V	E	F	E	K	A	F	A	D	Y	C	G	V	K	H	A	I	A	C	N	N	G	T	T	A	L	H	L	A	L	V	A	M	G	I	G	P	G	D	E	V	I	V	P	S	L	.	.	.	.	.	.	.	.	.	T	Y	I	A	S
Template Known Secondary structure											T		.		S	S		S															T		S						S														T			T	T							S	S	.	.	.	.	.	.	.	.	.	S		T
Template Predicted Secondary structure													.																																																							.	.	.	.	.	.	.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30		.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.										.	.	.	.	.
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	G	H	S	Q	I	N	G	C	T	V	R	N	V	Y	I	K	E	A	F	D	T	G	V	R	Y	D	F	K	G	N	F	D	L	E	G	L	E	R	G	I	E	E	V	G	P	N	N	V	P	Y	I	V	A	T	I	T	S	N	S	A	G	G	Q	P	V	S	L	A	N	L	K	A	M	Y	S	I	A	K	K
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.													.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.													.	.	.	.
Template Sequence		A	N	S	V	T	Y	C	G	A	T	P	V	L	V	D	N	D	P	R	.	.	.	.	.	.	.	.	.	T	F	N	L	D	A	A	K	L	E	A	L	I	T	P	.	.	.	.	.	.	.	R	T	K	A	I	M	P	V	H	L	Y	G	.	.	.	.	Q	I	C	D	M	D	P	I	L	E	V	A	R	R
Template Known Secondary structure								T	T								B		T	T	.	.	.	.	.	.	.	.	.	T		S	B		G	G	G	T	G	G	G			T	.	.	.	.	.	.	.	T							B		G	G	G	.	.	.	.
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.													.	.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.										.	110	.	.	.	.	.	.	.	.	.	120	.	.	.								.	.	.	.	.	.	130	.	.	.	.	.					.	.	.	.	140	.	.	.	.	.	.	.	.	.
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	D	I	P	V	V	M	D	S	A	R	F	A	E	N	A	Y	F	I	K	Q	R	E	A	E	Y	K	D	W	T	I	E	Q	I	T	R	E	T	Y	K	Y	A	D	M	L	A	M	S	A	K	K	D	A	M	V	P	M	G	G	L	L	C	M	K	D	D	S	F	F	D	V	Y	T	E	C	R	T	L	C	V
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	N	L	L	V	I	E	D	A	A	E	A	V	G	A	T	Y	R	G	K	K	S	G	S	L	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	A	T	F	S	F	F	G	N	A	I	I	T	T	G	E	G	G	M	I	T	T	N	D	D	D	L	A	A	K	M	R	L	L	R	G	Q	G	M
Template Known Secondary structure		T	T								T	T		T	T				T	T			T	T	S	S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.							B	T	T	S	S	S			B	S							S													B	T	T
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.															.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		300	.	.	.	.	.	.	.	.	.	310					.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure													.	.	.	.
Query SS confidence													.	.	.	.
Query Sequence		V	Q	E	G	F	P	T	Y	G	G	L	.	.	.	.	E	G	G	A	M	E	R	L	A	V	G	L	Y	D	G	M	N	L	D	W	L	A	Y	R	I	A	Q	V	Q	Y	L	V	D	G	L	E	E	I	G	V	V	C	Q	Q	A	G	G	H	A	A	F	V	D	A	G	K	L	L	P	H	I	P	A	D	Q
Query Conservation													.	.	.	.
Alig confidence													.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	P	N	R	R	Y	W	F	P	I	V	G	F	N	Y	R	M	T	N	I	Q	A	A	I	G	L	A	Q	L	E	R	V	D	E	H	L	A	A	R	E	R	V	V	G	W	Y	E	Q	K	L	A	R	L	G	N	.	.	.	.	.	.	.	.	.	.	.	.	.	R	V	T	K	P	H	V	A	L	T	G	R
Template Known Secondary structure			T	T	S	T	T			S	S				B		B															T																			G	G	G	G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	G								T	T	S
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270														.	.	.	.	.	.	.	.	.	280	.	.
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.																						.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	P	A	Q	A	L	A	C	E	L	Y	K	V	A	G	I	R	A	V	E	I	G	S	F	L	L	G	R	D	P	K	T	G	K	Q	L	P	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	A	E	L	L	R	L	T	I	P	R	A	T	Y	T	Q	T	H	M	D	F
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Conservation																																																																						.
Template Sequence		H	V	F	W	M	Y	T	V	R	L	G	E	G	L	S	T	T	R	D	Q	V	I	K	D	L	D	A	L	G	I	E	S	R	P	V	F	H	P	M	H	I	M	P	P	Y	A	H	L	A	T	D	D	L	K	I	A	E	A	C	G	V	D	G	L	N	L	P	T	.	H	A	G	L	T	E	A	D	I	D	R
Template Known Secondary structure					S	S							T	T		S	S												T	T	B									G	G	G	S	G	G	G	G	G	G			T	T																	.		T	T
Template Predicted Secondary structure																																																																						.
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350		.	.	.	.	.	.	.	.	.	360	.
		435	.	.	.	.	440	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	E	A	F	K	H	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	I	A	A	L	D	Q	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		362	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions