Job Description P0A853 Confidence 99.75% Date Thu Jan 5 11:06:55 GMT 2012 Rank 222 Aligned Residues 326 % Identity 13% Template c3d6kB_ PDB info PDB header:transferase Chain: B: PDB Molecule:putative aminotransferase; PDBTitle: the crystal structure of a putative aminotransferase from2 corynebacterium diphtheriae Resolution 2.00 Å

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		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.			.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.															.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	S	G	S	R	S	Y	Y	A	L	A	E	S	V	K	N	I	F	G	Y	Q	.	.	Y	T	I	P	T	H	Q	G	R	G	A	E	Q	I	Y	I	P	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	I	K	K	R	E	Q	E	K	G	L	D	R	S	K	M	V	A	F	S	N	Y	F	F	D
Query Conservation																							.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.
Template Conservation																																																																						.	.	.	.	.	.	.	.	.
Template Sequence		Y	G	G	L	L	G	I	A	D	I	R	E	L	W	A	E	A	L	G	L	P	A	D	L	V	V	A	Q	D	G	S	S	L	N	I	X	F	D	L	I	S	W	S	Y	T	W	G	N	N	D	S	S	R	P	W	S	A	E	E	K	V	K	W	L	C	P	V	P	.	.	.	.	.	.	.	.	.	G	Y	D
Template Known Secondary structure		S			S	S														T			G	G	G					S	S																			T	T		S	S		G	G	G	S	S									S	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.										.	.	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	T	Q	G	H	S	Q	I	N	G	C	T	V	R	N	V	Y	I	K	E	A	F	D	T	G	V	R	Y	D	F	K	G	N	F	D	L	E	G	L	E	R	G	I	E	E	V	G	P	N	N	V	P	Y	I	V	A	T	I	T	S	N	S	A	G	G	Q	P	V	S	L	A	N	L	K	A	M	Y	S	I	A
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.																	.	.															.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.																	.	.															.
Template Sequence		R	H	F	T	I	T	E	H	F	G	F	E	X	I	N	V	P	X	T	D	.	.	.	.	.	.	.	.	.	.	.	E	G	P	D	X	G	V	V	R	E	L	V	K	D	P	Q	.	.	V	K	G	X	W	T	V	P	V	F	G	N	P	T	.	G	V	T	F	S	E	Q	T	C	R	E	L	A	E	X	S
Template Known Secondary structure										T	T										T	.	.	.	.	.	.	.	.	.	.	.	T											T	T	S	T	T	.	.									S	S		T	T	T	.
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.																	.	.															.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.												160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.			.	.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		218	.	220		.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.			.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure					.																																																									.	.
Query SS confidence					.																																																									.	.
Query Sequence		K	K	Y	.	D	I	P	V	V	M	D	S	A	R	F	A	E	N	A	Y	F	I	K	Q	R	E	A	E	Y	K	D	W	T	I	E	Q	I	T	R	E	T	Y	K	Y	A	D	M	L	A	M	S	A	K	K	D	A	M	V	P	M	.	.	G	G	L	L	C	M	K	D	D	S	F	F	D	V	Y	T	E	C
Query Conservation					.																																																									.	.
Alig confidence					.												.	.	.	.	.																																									.	.
Template Conservation																	.	.	.	.	.
Template Sequence		T	A	A	P	D	F	R	I	V	W	D	N	A	Y	A	.	.	.	.	.	L	H	T	L	S	D	E	F	P	I	V	H	N	V	I	E	F	A	Q	A	A	G	N	P	N	R	F	W	F	X	S	S	T	S	K	I	T	H	A	G	S	G	V	S	F	F	A	S	S	K	E	N	I	E	W	Y	A	S	H	A
Template Known Secondary structure			S	S	T	T								T	T	T	.	.	.	.	.	T		B	S	S	S																T		T	T								S	T	T	T	S		T	T	S	S
Template Predicted Secondary structure																	.	.	.	.	.
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220						.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.			.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
Predicted Secondary structure																																																											.	.
Query SS confidence																																																											.	.
Query Sequence		R	T	L	C	V	V	Q	E	G	F	P	T	Y	G	G	L	E	G	G	A	M	E	R	L	A	V	G	L	Y	D	G	M	N	L	D	W	L	A	Y	R	I	A	Q	V	Q	Y	L	V	D	G	L	E	E	I	G	V	V	.	.	C	Q	Q	A	G	G	H	A	A	F	V	D	A	G	K	L	L	P	H	I	P
Query Conservation																																																											.	.
Alig confidence																																																											.	.																	.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		N	V	R	G	I	G	P	N	K	L	N	Q	L	A	H	A	Q	F	F	G	D	V	A	G	L	K	A	H	X	L	K	H	A	A	S	L	A	P	K	F	E	R	V	L	E	I	L	D	S	R	L	S	E	Y	G	V	A	K	W	T	S	P	T	G	G	Y	F	I	S	V	D	V	V	P	G	.	.	.	.	.
Template Known Secondary structure						S																S																															G	G	G		S							S	B	S	S							S	T	T	.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	Q	F	P	A	Q	A	L	A	C	E	L	Y	K	V	A	G	I	R	A	V	E	I	G	S	F	L	L	G	R	D	P	K	T	G	K	Q	L	P	C	P	A	E	L	L	R	L	T	I	P	R	A	T	Y	T	Q	T	H	M	D	F	I	I	E	A	F	K	H	V	K	E	N	A
Query Conservation
Alig confidence		.	.	.	.	.																								.	.	.	.	.	.	.															.	.
Template Conservation		.	.	.	.	.																								.	.	.	.	.	.	.															.	.
Template Sequence		.	.	.	.	.	T	A	S	R	V	V	E	L	A	K	E	A	G	I	A	L	T	G	A	G	S	S	F	.	.	.	.	.	.	.	P	L	H	N	D	P	N	N	E	N	I	R	L	A	.	.	P	S	L	P	P	V	A	E	L	E	V	A	X	D	G	F	A	T	C	V	L	X	A
Template Known Secondary structure		.	.	.	.	.												T	T						T	T	T	T	S	.	.	.	.	.	.	.	G	G	G			T	T	S							.	.		S	S	S
Template Predicted Secondary structure		.	.	.	.	.																								.	.	.	.	.	.	.															.	.
Template SS confidence
							356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.								.	380	.	.	.	.	.	.	.	.	.	390	.	.			.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions