Job Description P0A853 Confidence 99.98% Date Thu Jan 5 11:06:55 GMT 2012 Rank 41 Aligned Residues 382 % Identity 16% Template c3bcxA_ PDB info PDB header:transferase Chain: A: PDB Molecule:cdp-6-deoxy-l-threo-d-glycero-4-hexulose-3- PDBTitle: e1 dehydrase Resolution 2.40 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	R	E	E	A	I	I	K	S	G	M	N	P	F	L	L	D	S	E	D	V	F	I	D	L	L	T	D	S	G	T	G	A	V	T	Q	S	M	Q	A	A	M	M	R	G	D	E	A	Y	S	G	S	R	S	Y	Y	A	L	A	E	S	V	K	N	I	F	G	Y	Q	Y	T	I	P	T	H	Q	G	R	G	A
Query Conservation
Alig confidence																																															.	.
Template Conservation																																															.	.
Template Sequence		E	L	V	A	Q	Y	A	E	T	A	M	A	P	K	P	F	E	A	G	K	S	V	V	P	P	S	G	K	V	I	G	T	K	E	L	Q	L	M	V	E	A	S	L	D	G	.	.	W	L	T	T	G	R	F	N	D	A	F	E	K	K	L	G	E	Y	L	G	V	P	Y	V	L	T	T	T	S	G	S	S	A
Template Known Secondary structure												T							T	T	T	S		B		S																				T	.	.			B	S																T		S						S
Template Predicted Secondary structure																																															.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	I	Y	I	P	V	L	I	K	K	R	E	Q	E	K	G	L	D	R	S	K	M	V	A	F	S	N	Y	F	F	D	T	T	Q	G	H	S	Q	I	N	G	C	T	V	R	N	V	Y	I	K	E	A	F	D	T	G	V	R	Y	D	F	K	G	N	F	D	L	E	G	L	E	R	G	I	E	E	V	G	P
Query Conservation
Alig confidence																																																							.	.	.	.	.	.	.	.	.																.	.	.
Template Conservation																																																							.	.	.	.	.	.	.	.	.																.	.	.
Template Sequence		N	L	L	A	L	T	A	L	T	S	P	K	L	G	V	R	A	L	K	P	G	D	E	V	I	T	V	A	A	G	F	P	T	T	V	N	P	T	I	Q	N	G	L	I	P	V	F	V	D	V	D	I	P	.	.	.	.	.	.	.	.	.	T	Y	N	V	N	A	S	L	I	E	A	A	V	S	D	.	.	.
Template Known Secondary structure									T	T		G	G	G	G	G	G	S			T	T							S	S	S											T	T								B		T	T	.	.	.	.	.	.	.	.	.	T		S	B		G	G	G							S	.	.	.
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.																.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.										.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	N	V	P	Y	I	V	A	T	I	T	S	N	S	A	G	G	Q	P	V	S	L	A	N	L	K	A	M	Y	S	I	A	K	K	Y	D	I	P	V	V	M	D	S	A	R	F	A	E	N	A	Y	F	I	K	Q	R	E	A	E	Y	K	D	W	T	I	E	Q	I	T	R	E	T	Y	K	Y	A	D	M	L	A
Query Conservation
Alig confidence		.												.	.	.	.						.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.												.	.	.	.						.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	K	T	K	A	I	M	I	A	H	T	L	.	.	.	.	G	N	L	F	D	.	.	.	L	A	E	V	R	R	V	A	D	K	Y	N	L	W	L	I	E	D	C	C	D	A	L	G	S	T	Y	D	G	K	M	A	G	T	F	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	G	T	V	S
Template Known Secondary structure		.	S									G	G	.	.	.	.	G					.	.	.												T								T	T		T	T				T	T			T	T	S	S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.												.	.	.	.						.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			158	.	160	.	.	.	.	.	.	.	.					.	170	.	.	.				.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210															.	.	.	.	.
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.														.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.		.	.	330	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Query Sequence		M	S	A	K	K	D	A	M	V	P	M	G	G	L	L	C	M	K	D	D	S	F	F	D	V	Y	T	E	C	R	T	L	C	V	V	Q	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	F	P	T	Y	G	G	L	E	G	G	A	M	E	R	L	A	V	G	L	Y	D	G	M	N	.	L	D	W	L
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template Conservation
Template Sequence		F	Y	P	A	H	H	I	T	M	G	E	G	G	A	V	F	T	Q	S	A	E	L	K	S	I	I	E	S	F	R	D	W	G	R	D	C	Y	C	L	G	S	L	P	F	G	Y	D	H	K	Y	T	Y	S	H	L	G	Y	N	L	K	I	T	D	M	Q	A	A	C	G	L	A	Q	L	E	R	I	E	E	F	V
Template Known Secondary structure			S	T	T	S	S	S			S	S							S													B	T	T	B										T	T			G	G	G		B		S				B				B
Template Predicted Secondary structure
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.		.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		A	Y	R	I	A	Q	V	Q	Y	L	V	D	G	L	E	E	I	.	G	V	V	C	Q	Q	A	G	G	H	A	A	F	V	D	A	G	K	L	L	P	H	I	P	A	D	Q	F	P	A	Q	A	L	A	C	E	L	Y	K	V	A	G	I	R	A	V	E	I	G	S	F	L	L	G	R	D	P	K	T	G	K	Q
Query Conservation																			.
Alig confidence																			.
Template Conservation
Template Sequence		E	K	R	K	A	N	F	K	Y	L	K	D	A	L	Q	S	C	A	D	F	I	E	L	P	E	A	T	E	N	S	D	P	S	W	F	G	F	P	I	T	L	K	E	D	S	G	V	S	R	I	D	L	V	K	F	L	D	E	A	K	V	G	T	R	L	L	F	A	G	N	L	T	R	Q	P	Y	F	H	D	V
Template Known Secondary structure															G	G	G	G	T	T	T								T	T						S	S							G	G	G	S	S												T	T	B			B			T	T	S	S	G	G	G	S	G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
		411	.	.	.	.	.	.												.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	P	C	P	A	E	L	.	.	.	.	.	.	.	.	.	.	.	L	R	L	T	I	P	R	A	T	Y	T	Q	T	H	M	D	F	I	I	E	A	F	K	H	V	K	E
Query Conservation									.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.						.
Template Conservation																									.
Template Sequence		K	Y	R	V	V	G	E	L	T	N	T	D	R	I	M	N	Q	T	F	W	I	G	I	.	Y	P	G	L	T	H	D	H	L	D	Y	V	V	S	K	F	E	E	F	F	G
Template Known Secondary structure							S																		.	S	T	T																	T	T
Template Predicted Secondary structure																									.
Template SS confidence
		391	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.		.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.