Job Description P0A853 Confidence 99.82% Date Thu Jan 5 11:06:55 GMT 2012 Rank 198 Aligned Residues 294 % Identity 15% Template c2x3lA_ PDB info PDB header:lyase Chain: A: PDB Molecule:orn/lys/arg decarboxylase family protein; PDBTitle: crystal structure of the orn_lys_arg decarboxylase family2 protein sar0482 from methicillin-resistant staphylococcus3 aureus Resolution 2.00 Å

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		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	A	Y	S	G	S	R	S	Y	Y	A	L	A	E	S	V	K	N	I	F	G	Y	Q	Y	T	I	P	T	H	Q	G	R	G	A	E	Q	I	Y	I	P	V	L	I	K	K	R	E	Q	E	K	G	L	D	R	S	K	M	V	A	F	S	N	Y	F	F	D	T	T	Q	G	H	S	Q	I	N	G	C	T	V
Query Conservation
Alig confidence																																																												.	.	.	.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.	.	.	.
Template Sequence		D	D	L	H	H	P	E	E	V	I	L	K	S	M	K	Q	V	E	K	H	S	D	Y	D	G	Y	F	L	V	N	G	T	T	S	G	I	L	S	V	I	Q	S	F	S	Q	K	K	G	D	I	L	M	A	R	N	V	H	K	.	.	.	.	.	.	.	.	.	S	V	L	H	A	L	D	I	S	Q	Q	E	G
Template Known Secondary structure				T	T	S		S	S											S		T	T							S	S												T	T	T	T	S	S	S						T	T				.	.	.	.	.	.	.	.	.										T
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.
Template SS confidence
		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.										.	.	110	.	.	.	.	.	.	.	.	.	120
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		R	N	V	Y	I	K	E	A	F	D	T	G	V	R	Y	D	F	K	G	N	F	D	L	E	G	L	E	R	G	I	E	E	V	G	P	N	N	V	P	Y	I	V	A	T	I	T	S	N	S	A	G	G	Q	P	V	S	L	A	N	L	K	A	M	Y	S	I	A	K	K	Y	D	I	P	V	V	M	D	S	A	R
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.											.					.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.											.					.	.	.	.
Template Sequence		H	F	I	E	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	Q	S	P	L	T	N	H	Y	N	K	V	N	.	.	L	H	K	L	V	V	L	T	Y	P	.	N	Y	Y	G	.	.	.	.	E	T	F	N	V	E	E	V	I	K	S	L	H	Q	L	N	I	P	V	L	I	D	E	A	H
Template Known Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T	T	S	S						.	.									S	S	.		T	T	S	.	.	.	.															T	T								T	T
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.											.					.	.	.	.
Template SS confidence
		121	.	.	.	.																	.	.	.	.	130	.	.	.	.	.	.	.	.			.	140	.	.	.	.	.	.	.	.		.	150	.	.					.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	E	N	A	Y	F	I	K	Q	R	E	A	E	Y	K	D	W	T	I	E	Q	I	T	R	E	T	Y	K	Y	A	D	M	L	A	M	S	A	K	K	D	A	M	V	P	M	G	G	L	L	C	M	K	D	D	S	F	F	D	V	Y	T	E	C	R	T	L	C	V	V	Q	E	G	F	P	T	Y	G	G	L
Query Conservation
Alig confidence								.	.	.	.	.	.	.												.	.	.	.	.	.																										.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.												.	.	.	.	.	.																										.	.	.	.	.	.
Template Sequence		G	A	H	F	G	L	.	.	.	.	.	.	.	Q	G	F	P	D	S	T	L	N	Y	Q	.	.	.	.	.	.	A	D	Y	V	V	Q	S	F	H	T	L	P	A	L	T	M	G	S	V	L	Y	I	H	K	N	.	.	.	.	.	.	A	P	Y	R	E	N	I	I	E	Y	L	S	Y	F	Q	T	S	S	P
Template Known Secondary structure			T	T	T	T	S	.	.	.	.	.	.	.	T	T	S				G	G	G	G	T	.	.	.	.	.	.		S										S	S		T	T								T	T	.	.	.	.	.	.		T	T												S		S	S
Template Predicted Secondary structure								.	.	.	.	.	.	.												.	.	.	.	.	.																										.	.	.	.	.	.
Template SS confidence
		185	.	.	.	.	190								.	.	.	.	.	.	.	.	.	200	.							.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.							.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.		.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																															.
Query SS confidence																																															.
Query Sequence		E	G	G	A	M	E	R	L	A	V	G	L	Y	D	G	M	N	L	D	W	L	A	Y	R	I	A	Q	V	Q	Y	L	V	D	G	L	E	E	I	G	V	V	C	Q	Q	A	.	G	G	H	A	A	F	V	D	A	G	K	L	L	P	H	I	P	A	D	Q	F	P	A	Q	A	L	A	C	E	L	Y	K	V	A
Query Conservation																																															.
Alig confidence																						.																									.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	Y	L	I	M	A	S	L	E	S	A	A	Q	F	Y	K	T	Y	D	S	.	T	L	F	F	A	K	R	A	Q	L	I	E	C	L	E	N	K	G	F	E	M	L	Q	V	D	D	P	L	K	L	L	I	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	E
Template Known Secondary structure																						.																		T							S	S	T	T						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T
Template Predicted Secondary structure																						.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.		.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.																									300	.
		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	R	A	V	E	I	G	S	F	L	L	G	R	D	P	K	T	G	K	Q	L	P	C	P	A	E	L	L	R	L	T	I	P	R	A	T	Y	T	Q	T	H	M	D	F	I	I	E	A	F	K	H	V
Query Conservation
Alig confidence																	.																	.
Template Conservation																	.																	.
Template Sequence		G	F	T	G	H	D	I	Q	N	W	F	M	N	A	H	.	I	Y	L	E	L	A	D	D	Y	Q	A	L	A	I	L	P	.	L	W	H	H	D	D	T	Y	L	F	D	S	L	L	R	K	I	E	D	M
Template Known Secondary structure		T	S												T	T	.				S				S	S								.				T	T														T
Template Predicted Secondary structure																	.																	.
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.		.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.		.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions