Job Description P0A853 Confidence 99.95% Date Thu Jan 5 11:06:55 GMT 2012 Rank 72 Aligned Residues 345 % Identity 15% Template c2po3B_ PDB info PDB header:transferase Chain: B: PDB Molecule:4-dehydrase; PDBTitle: crystal structure analysis of desi in the presence of its2 tdp-sugar product Resolution 2.10 Å

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		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	Q	S	M	Q	A	A	M	M	R	G	D	E	A	Y	S	G	S	R	S	Y	Y	A	L	A	E	S	V	K	N	I	F	G	Y	Q	Y	T	I	P	T	H	Q	G	R	G	A	E	Q	I	Y	I	P	V	L	I	K	K	R	E	Q	E	K	G	L	D	R	S	K	M	V	A	F	S	N	Y	F	F	D	T
Query Conservation
Alig confidence															.																																										.															.	.	.	.	.	.	.	.	.
Template Conservation															.																																										.															.	.	.	.	.	.	.	.	.
Template Sequence		L	Y	E	R	L	D	R	A	L	D	S	Q	W	.	L	S	N	G	G	P	L	V	R	E	F	E	E	R	V	A	G	L	A	G	V	R	H	A	V	A	T	C	N	A	T	A	G	L	Q	L	L	A	H	A	A	.	G	L	T	G	E	V	I	M	P	S	M	T	F	A	.	.	.	.	.	.	.	.	.	A
Template Known Secondary structure													T		.		S	S	S																T	S	S						S														.	T			S						S	S	S		T	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure															.																																										.															.	.	.	.	.	.	.	.	.
Template SS confidence
		2034	.	.	.	.	.	2040	.	.	.	.	.	.		.	.	.	2050	.	.	.	.	.	.	.	.	.	2060	.	.	.	.	.	.	.	.	.	2070	.	.	.	.	.	.	.	.	.	2080	.	.	.	.	.	.	.		.	.	2090	.	.	.	.	.	.	.	.	.	2100	.										.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Q	G	H	S	Q	I	N	G	C	T	V	R	N	V	Y	I	K	E	A	F	D	T	G	V	R	Y	D	F	K	G	N	F	D	L	E	G	L	E	R	G	I	E	E	V	G	P	N	N	V	P	Y	I	V	A	T	I	T	S	N	S	A	G	G	Q	P	V	S	L	A	N	L	K	A	M	Y	S	I	A	K
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.																.	.	.	.																.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.																.	.	.	.																.	.	.	.	.	.	.
Template Sequence		T	P	H	A	L	R	W	I	G	L	T	P	V	F	A	D	I	D	P	D	.	.	.	.	.	.	.	.	.	T	G	N	L	D	P	D	Q	V	A	A	A	V	T	P	.	.	.	.	R	T	S	A	V	V	G	V	H	L	W	G	R	P	C	.	.	.	.	.	.	.	A	A	D	Q	L	R	K	V	A	D
Template Known Secondary structure									T	T								B		T	T	.	.	.	.	.	.	.	.	.	T	S	S	B		S	T	T							T	.	.	.	.	T									G	G	G				.	.	.	.	.	.	.
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.																.	.	.	.																.	.	.	.	.	.	.
Template SS confidence
		2103	.	.	.	.	.	.	2110	.	.	.	.	.	.	.	.	.	2120	.	.										.	.	.	.	.	.	.	2130	.	.	.	.	.	.	.					.	.	2140	.	.	.	.	.	.	.	.	.	2150	.	.								.	.	.	.	.	.	.	2160	.	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Y	D	I	P	V	V	M	D	S	A	R	F	A	E	N	A	Y	F	I	K	Q	R	E	A	E	Y	K	D	W	T	I	E	Q	I	T	R	E	T	Y	K	Y	A	D	M	L	A	M	S	A	K	K	D	A	M	V	P	M	G	G	L	L	C	M	K	D	D	S	F	F	D	V	Y	T	E	C	R	T	L	C
Query Conservation
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	H	G	L	R	L	Y	F	D	A	A	H	A	L	G	C	A	V	D	G	R	P	A	G	S	L	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	V	F	S	F	H	A	T	K	A	V	N	A	F	E	G	G	A	V	V	T	D	D	A	D	L	A	A	R	I	R	A	L	H	N	F	G
Template Known Secondary structure				T								T	T		T	T				T	T			T	T	S	S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S							T	T	S	S	S			S	S							S												T	B	T	T
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2163	.	.	.	.	.	.	2170	.	.	.	.	.	.	.	.	.	2180	.	.	.	.	.	.	.	.	.	2190															.	.	.	.	.	.	.	.	.	2200	.	.	.	.	.	.	.	.	.	2210	.	.	.	.	.	.	.	.	.	2220	.	.	.	.	.	.	.	.
		299	300	.	.	.	.	.	.	.	.	.	310	.		.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.		.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350		.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure															.																	.																								.
Query SS confidence															.																	.																								.
Query Sequence		V	V	Q	E	G	F	P	T	Y	G	G	L	E	.	G	G	A	M	E	R	L	A	V	G	L	Y	D	G	M	N	.	L	D	W	L	A	Y	R	I	A	Q	V	Q	Y	L	V	D	G	L	E	E	I	G	V	.	V	C	Q	Q	A	G	G	H	A	A	F	V	D	A	G	K	L	L	P	H	I	P	A	D	Q
Query Conservation															.																	.																								.
Alig confidence															.																	.																								.
Template Conservation
Template Sequence		F	D	L	P	G	G	S	P	A	G	G	T	N	A	K	M	S	E	A	A	A	A	M	G	L	T	S	L	D	A	F	P	E	V	I	D	R	N	R	R	N	H	A	A	Y	R	E	H	L	A	D	L	P	G	V	L	V	A	D	H	D	R	H	G	L	N	N	H	Q	Y	V	I	V	E	I	D	E	A	T	T
Template Known Secondary structure		T	T		T	T			T	T				B		B																																		T		S		T	T						G	G	G	G	S	B
Template Predicted Secondary structure
Template SS confidence
		2229	2230	.	.	.	.	.	.	.	.	.	2240	.	.	.	.	.	.	.	.	.	2250	.	.	.	.	.	.	.	.	.	2260	.	.	.	.	.	.	.	.	.	2270	.	.	.	.	.	.	.	.	.	2280	.	.	.	.	.	.	.	.	.	2290	.	.	.	.	.	.	.	.	.	2300	.	.	.	.	.	.	.	.
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.									.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.
Query Sequence		F	P	A	Q	A	L	A	C	E	L	Y	K	V	A	G	I	R	A	V	E	I	G	S	F	L	L	G	R	D	P	K	T	G	K	Q	L	P	C	P	.	.	.	.	.	.	.	.	A	E	L	L	R	L	T	I	P	R	A	T	Y	T	Q	T	H	M	D	F	I	I	E	A	F	K	H	V	K	E	N	A	A
Query Conservation																																									.	.	.	.	.	.	.	.
Alig confidence																																									.	.	.	.	.	.	.	.									.
Template Conservation																																																									.
Template Sequence		G	I	H	R	D	L	V	M	E	V	L	K	A	E	G	V	H	T	R	A	Y	F	S	P	G	C	H	E	L	E	P	Y	R	G	Q	P	H	A	P	L	P	H	T	E	R	L	A	A	R	V	L	S	L	P	T	.	G	T	A	I	G	D	D	D	I	R	R	V	A	D	L	L	R	L	C	A	T	R	G	R
Template Known Secondary structure		S	S												T	T				B		T	T		S		G	G	G	S	T	T	T	T	T	S													T	T							.	S	T	T																			S
Template Predicted Secondary structure																																																									.
Template SS confidence
		2309	2310	.	.	.	.	.	.	.	.	.	2320	.	.	.	.	.	.	.	.	.	2330	.	.	.	.	.	.	.	.	.	2340	.	.	.	.	.	.	.	.	.	2350	.	.	.	.	.	.	.	.	.	2360	.	.	.		.	.	.	.	.	.	2370	.	.	.	.	.	.	.	.	.	2380	.	.	.	.	.	.	.
		448	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		2388	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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