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Job DescriptionP0A853
Confidence100.00%DateThu Jan 5 11:06:55 GMT 2012
Rank29Aligned Residues373
% Identity14%Templatec2pb2B_
PDB info PDB header:transferaseChain: B: PDB Molecule:acetylornithine/succinyldiaminopimelate aminotransferase; PDBTitle: structure of biosynthetic n-acetylornithine aminotransferase from2 salmonella typhimurium: studies on substrate specificity and3 inhibitor binding
Resolution1.91 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30.........40.........50.........60.........70. ........80.....
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Query Sequence  PEPFRIRVIEPVKRTTRAYREEAIIKSGMNPFLLDSEDVFIDLLTDSGTGAVTQSMQAAMMRGD. . EAYSGSRSYYALAE
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Template Sequence  PADFIPVKGKGSRVWDQQGKEYIDFAGGIAVTALGHCHPAL. . . . . . . . . . . VEALKSQGETLWHTSNVFTNEPALRLGR
Template Known Secondary structure 
TT

BTTT

SST
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BS
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   23......30.........40.........50.........60... ......70.........80.........90.
 
   86...90.........100.........110.........120.........130.........140.........150.........160.....
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Query Sequence  SVKNIFGYQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRY
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Template Sequence  KLIDATFAERVLFMNSGTEANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHV
Template Known Secondary structure  SS
SSST
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SSSS
TTSSS

S
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   92.......100.........110.........120.........130.........140.........150.........160.........170.
 
   166...170.........180.........190.........200.........210.........220.........230.........240.....
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Query Sequence  DFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEY
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Template Sequence  PFN. . . DLHAVKAVMDD. . . . HTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQC. . . . . . . . . . . . GM
Template Known Secondary structure 
TT...


T....T
STTTTS

T

TTT............TT
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   172.. .....180..... ....190.........200.........210.........220.........230 ..
 
   246...250.........260.........270.........280.........290.........300.........310.........320.....
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Query Sequence  KDWTIEQITRETYKYADMLAMSAKKDAMVPMGGLLCMKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDG
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Template Sequence  GRTGDLFAYMHYGVTPDILTSAKALGGGFPVSAMLTTQEI. . . . . . . . . . . . . . . ASAFSTYGGNPLACAVAGAA. FDII
Template Known Secondary structure  TTTSSSST


S
GGGTTTS


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   233......240.........250.........260.........270.. .......280.........290.. ....
 
   326...330.........340.........350.........360.........370.........380.........390.........400.....
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Query Sequence  MNLDWLAYRIAQVQYLVDGLEEIGVVCQQAGGHAAFVDAGKLLPHIPADQFPAQALACELYKVAGIRAVEIGSFLLGRDP
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Template Sequence  NTPEVLQGIHTKRQQFVQHLQAI. DEQFDIFSDIRGMGLLIGAELKPKYKGRARDFLYAGA. EAGVM. . . . . . . . . . . . .
Template Known Secondary structure  SS.

TT
GGGTT
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   303......310.........320..... ....330.........340.........350.........360.. .....
 
   406...410.........420.........430.........440......
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Query Sequence  KTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKENA
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Template Sequence  . . . . VLNAGADVMRFA. PSLVVEEADIHEGMQRFAQAVGKV
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SSTT
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   368.370......... 380.........390.........400...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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