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Job DescriptionP0A853
Confidence100.00%DateThu Jan 5 11:06:55 GMT 2012
Rank34Aligned Residues379
% Identity16%Templatec2ordA_
PDB info PDB header:transferaseChain: A: PDB Molecule:acetylornithine aminotransferase; PDBTitle: crystal structure of acetylornithine aminotransferase (ec 2.6.1.11)2 (acoat) (tm1785) from thermotoga maritima at 1.40 a resolution
Resolution1.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70... ......80
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Query Sequence  NFKHLPEPFRIRVIEPVKRTTRAYREEAIIKSGMNPFLLDSEDVFIDLLTDSGTGAVTQSMQAAMMRGDEA. . YSGSRSY
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Template Sequence  XNTYSRFPATFVYGKGSWIYDEKGNAYLDFTSGIAVNVLGHSHPRL. . . . . . . . . . . VEAIKDQAEKLIHCSNLFWNRPQ
Template Known Secondary structure 
S




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BTTT

SST
TT
BT
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   4.....10.........20.........30.........40......... 50.........60.........70..
 
   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  YALAESVKNIFGYQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTVRNVYIKEAFD
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Template Sequence  XELAELLSKNTFGGKVFFANTGTEANEAAIKIARKYGKKKSEKKYRILSAHNSFHG. RTLGSLTATGQPKYQKPFEPLVP
Template Known Secondary structure  TTTS
SS
TT

BT



.SSSB
GGG
S

T
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   73......80.........90.........100.........110.........120........ .130.........140.........150.
 
   161........170.........180.........190.........200.........210.........220.........230.........240
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Query Sequence  TGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQ
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Template Sequence  GFEYFEFN. . . NVEDLRRKXSE. . . . DVCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQC. . . . . . . . .
Template Known Secondary structure  T
TT...


T....T
S
TTT


T

TTT.........
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   152....... 160.........170 .........180.........190.........200.........210.....
 
   241........250.........260.........270.........280.........290.........300.........310.........320
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Query Sequence  REAEYKDWTIEQITRETYKYADMLAMSAKKDAMVPMGGLLCMKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAV
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Template Sequence  . . . GXGRTGKLFAYQKYGVVPDVLTTAKGLGGGVPIGAVIVNERANVLEPGDHG. . . . . . . . . . . TTFGGNPLACRAGVT
Template Known Secondary structure  ...TTTTTSSSST


S
GGGGTTS


STT



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   216...220.........230.........240.........250.........260...... ...270.........280.
 
   321........330.........340.........350.........360.........370.........380.........390.........400
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Query Sequence  GLYDGMNLDWLAYRIAQVQYLVDGLEEIGVVCQQAGGHAAFVDAGKLLPHIPADQFPAQALACELYKVAGIRAVEIGSFL
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Template Sequence  VIKELTKEGFLEEVEEKGNYLXKKLQEX. . . KEEYDVVADVRGXGLXIGIQFREEVSNREVATKCF. ENKLLVVPAG. . .
Template Known Secondary structure  TSTT...
TTTT
TTS
.TT
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   282.......290.........300......... 310.........320.........330.........340.... .....350....
 
   401........410.........420.........430.........440.....
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Query Sequence  LGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKEN
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Template Sequence  . . . . . . . . . . . . . . NNTIRFL. PPLTVEYGEIDLAVETLKKVLQG
Template Known Secondary structure  ..............TT
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TT

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   355....360. ........370.........380....
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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