Job Description P0A853 Confidence 99.95% Date Thu Jan 5 11:06:55 GMT 2012 Rank 71 Aligned Residues 340 % Identity 16% Template c2ogeC_ PDB info PDB header:transferase Chain: C: PDB Molecule:transaminase; PDBTitle: x-ray structure of s. venezuelae desv in its internal2 aldimine form Resolution 2.05 Å

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		58	.	60	.	.	.	.	.	.	.	.			.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure													.	.																																														.
Query SS confidence													.	.																																														.
Query Sequence		A	V	T	Q	S	M	Q	A	A	M	M	.	.	R	G	D	E	A	Y	S	G	S	R	S	Y	Y	A	L	A	E	S	V	K	N	I	F	G	Y	Q	Y	T	I	P	T	H	Q	G	R	G	A	E	Q	I	Y	I	P	V	L	.	I	K	K	R	E	Q	E	K	G	L	D	R	S	K	M	V	A	F	S	N	Y
Query Conservation													.	.																																														.
Alig confidence													.	.																																														.																.	.	.	.	.	.
Template Conservation																																																																												.	.	.	.	.	.
Template Sequence		E	L	R	A	E	T	D	A	A	I	A	R	V	L	D	S	G	R	Y	L	L	G	P	E	L	E	G	F	E	A	E	F	A	A	Y	C	E	T	D	H	A	V	G	V	N	S	G	M	D	A	L	Q	L	A	L	R	G	L	G	I	G	P	G	D	E	V	I	V	P	S	H	T	Y	I	.	.	.	.	.	.
Template Known Secondary structure			T															T			S	S	S														T	T	S	S						S													T	T			T	T							S	S	S			.	.	.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.	.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	F	D	T	T	Q	G	H	S	Q	I	N	G	C	T	V	R	N	V	Y	I	K	E	A	F	D	T	G	V	R	Y	D	F	K	G	N	F	D	L	E	G	L	E	R	G	I	E	E	V	G	P	N	N	V	P	Y	I	V	A	T	I	T	S	N	S	A	G	G	Q	P	V	S	L	A	N	L	K	A	M	Y
Query Conservation
Alig confidence		.	.	.																						.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.													.	.	.	.
Template Conservation		.	.	.																						.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.													.	.	.	.
Template Sequence		.	.	.	A	S	W	L	A	V	S	A	T	G	A	T	P	V	P	V	E	P	H	E	D	.	.	.	.	.	.	.	.	.	H	P	T	L	D	P	L	L	V	E	K	A	I	T	P	.	.	.	.	.	.	.	R	T	R	A	L	L	P	V	H	L	Y	G	.	.	.	.	H	P	A	D	M	D	A	L	R
Template Known Secondary structure		.	.	.								T	T	T								B		S	S	.	.	.	.	.	.	.	.	.	S	S	S	B						G	G	G			S	.	.	.	.	.	.	.	S							B		G	G	G	.	.	.	.
Template Predicted Secondary structure		.	.	.																						.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.													.	.	.	.
Template SS confidence
					95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.										.	.	.	.	120	.	.	.	.	.	.	.	.	.	130								.	.	.	.	.	.	.	.	.	140	.	.					.	.	.	.	.	.	.	150	.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	A	K	K	Y	D	I	P	V	V	M	D	S	A	R	F	A	E	N	A	Y	F	I	K	Q	R	E	A	E	Y	K	D	W	T	I	E	Q	I	T	R	E	T	Y	K	Y	A	D	M	L	A	M	S	A	K	K	D	A	M	V	P	M	G	G	L	L	C	M	K	D	D	S	F	F	D	V	Y	T	E	C
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	L	A	D	R	H	G	L	H	I	V	E	D	A	A	Q	A	H	G	A	R	Y	R	G	R	R	I	G	A	G	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	A	F	S	F	Y	P	G	N	L	G	C	F	G	D	G	G	A	V	V	T	G	D	P	E	L	A	E	R	L	R	M	L
Template Known Secondary structure							T	T								T	T		T	T				T	T			T	T		T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.														S	S								S
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.															.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.			.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
Predicted Secondary structure																					.	.
Query SS confidence																					.	.
Query Sequence		R	T	L	C	V	V	Q	E	G	F	P	T	Y	G	G	L	E	G	G	.	.	A	M	E	R	L	A	V	G	L	Y	D	G	M	N	L	D	W	L	A	Y	R	I	A	Q	V	Q	Y	L	V	D	G	L	E	E	I	G	V	V	C	Q	Q	A	G	G	H	A	A	F	V	D	A	G	K	L	L	P	H	I	P
Query Conservation																					.	.
Alig confidence																					.	.																																																		.	.	.	.	.
Template Conservation																																																																								.	.	.	.	.
Template Sequence		R	N	Y	G	S	R	Q	K	Y	S	H	E	T	K	G	T	N	S	R	L	D	E	M	Q	A	A	V	L	R	I	R	L	A	H	L	D	S	W	N	G	R	R	S	A	L	A	A	E	Y	L	S	G	L	A	G	L	P	G	I	G	L	P	V	T	A	P	D	T	D	P	.	.	.	.	.	V	W	H	L	F
Template Known Secondary structure		T	B	T	T		S	B	T	T	B		S	S				B																	T																			T	T	T		T	T	S	B						T	T				.	.	.	.	.			S
Template Predicted Secondary structure																																																																								.	.	.	.	.
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.						.	290	.	.	.
		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.											.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.
Query Sequence		A	D	Q	F	P	A	Q	A	L	A	C	E	L	Y	K	V	A	G	I	R	A	V	E	I	G	S	F	L	L	G	R	D	P	K	T	G	K	Q	L	P	C	P	A	E	.	.	.	.	.	.	.	.	.	.	L	L	R	L	T	I	P	R	A	T	Y	T	Q	T	H	M	D	F	I	I	E	A	F	K	H	V
Query Conservation																																														.	.	.	.	.	.	.	.	.	.
Alig confidence																																														.	.	.	.	.	.	.	.	.	.							.
Template Conservation																																																														.
Template Sequence		T	V	R	T	E	R	R	D	E	L	R	S	H	L	D	A	R	G	I	D	T	L	T	H	Y	P	V	P	V	H	L	S	P	A	Y	A	G	E	A	P	P	E	G	S	L	P	R	A	E	S	F	A	R	Q	V	L	S	L	P	I	.	G	P	H	L	E	R	P	Q	A	L	R	V	I	D	A	V	R	E	W
Template Known Secondary structure						T	T											T	T	B			B		S		S	S		G	G	G	S	G	G	G	T	T	T	S			T	T	S																	.	S	T	T
Template Predicted Secondary structure																																																														.
Template SS confidence
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.		.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
		443	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	N	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	E	R	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		373	.	.	.

No model constructed - rank, confidence too low

---

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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