Job Description P0A853 Confidence 99.68% Date Thu Jan 5 11:06:55 GMT 2012 Rank 231 Aligned Residues 323 % Identity 17% Template c2fyfB_ PDB info PDB header:transferase Chain: B: PDB Molecule:phosphoserine aminotransferase; PDBTitle: structure of a putative phosphoserine aminotransferase from2 mycobacterium tuberculosis Resolution 1.50 Å

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		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80									.	.	.	.	.	.	.	.	.	90	.	.	.	.	.					.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure																														.	.	.	.	.	.	.	.																.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.																.	.	.	.
Query Sequence		D	S	G	T	G	A	V	T	Q	S	M	Q	A	A	M	M	R	G	D	E	A	Y	S	G	S	R	S	Y	.	.	.	.	.	.	.	.	Y	A	L	A	E	S	V	K	N	I	F	G	Y	Q	Y	.	.	.	.	T	I	P	T	H	Q	G	R	G	A	E	Q	I	Y	I	P	V	L	I	K	K	R	E	Q	E
Query Conservation																														.	.	.	.	.	.	.	.																.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.																.	.	.	.
Template Conservation
Template Sequence		G	S	G	P	S	K	V	R	L	E	Q	L	Q	T	L	T	T	T	A	A	A	L	F	G	T	S	H	R	Q	A	P	V	K	N	L	V	G	R	V	R	S	G	L	A	E	L	F	S	L	P	D	G	Y	E	V	I	L	G	N	G	G	A	T	A	F	W	D	A	A	A	F	G	L	I	D	K	R	S	L	H
Template Known Secondary structure			S	S	S									G	G	G	G	T	T	T	G	G	G	T	T	S		T	T	S																		T	T			T	T								T													T		S	S
Template Predicted Secondary structure
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure
Query SS confidence
Query Sequence		K	G	L	D	R	S	K	M	V	A	F	S	N	Y	F	F	D	T	T	Q	G	H	S	Q	I	N	G	C	T	V	R	N	V	Y	I	K	E	A	F	D	T	G	V	R	Y	D	F	K	G	N	F	D	L	E	G	L	E	R	G	I	E	E	V	G	P	N	N	V	P	Y	I	V	A	T	I	T	S	N	S	A
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	T	Y	G	E	.	.	.	.	.	.	.	.	.	F	S	A	K	F	A	S	A	V	S	K	N	P	F	V	G	E	P	I	I	I	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	P	G	S	A	P	E	P	Q	T	D	P	S	V	D	V	I	A	W	A	H	N	E	T	S	T
Template Known Secondary structure					S		.	.	.	.	.	.	.	.	.													T	T	S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T									T	T		S						S			T	T	T
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		103	.	.	.	.										.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130																		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	Q	P	V	S	L	A	N	L	K	A	M	Y	S	I	A	K	K	Y	D	I	P	V	V	M	D	S	A	R	F	A	E	N	A	Y	F	I	K	Q	R	E	A	E	Y	K	D	W	T	I	E	Q	I	T	R	E	T	Y	K	Y	A	D	M	L	A	M	S	A	K	K	D	A	M	V	P	M	G	G	L	L
Query Conservation
Alig confidence		.							.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.							.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	G	V	A	V	A	V	.	.	.	.	.	.	.	R	R	P	E	G	S	D	A	L	V	V	I	D	A	T	S	G	A	G	G	L	P	V	D	I	A	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	D	A	Y	Y	F	A	P	Q	K	N	F	A	S	D	G	G	L	W	L
Template Known Secondary structure		.	T						.	.	.	.	.	.	.				T	T										T	T	T	T	T	T	S				G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S						T	T	S	T	T		S		S	S
Template Predicted Secondary structure		.							.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			157	.	.	160	.	.								.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.																				190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.														300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.					.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.
Query Sequence		C	M	K	D	D	S	F	F	D	V	Y	T	E	C	R	T	L	C	V	.	.	.	.	.	.	.	.	.	.	.	.	.	V	Q	E	G	F	P	T	Y	G	G	L	E	G	G	A	M	E	R	L	A	V	G	L	Y	D	G	M	N	L	.	.	.	.	D	W	L	A	Y	R	I	A	Q	V	Q	Y	L	V	D
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.
Template Conservation
Template Sequence		A	I	M	S	P	A	A	L	S	R	I	E	A	I	A	A	T	G	R	W	V	P	D	F	L	S	L	P	I	A	V	E	N	S	L	K	N	Q	T	Y	N	T	P	A	I	A	T	L	A	L	L	A	E	Q	I	D	W	L	V	G	N	G	G	L	D	W	A	V	K	R	T	A	D	S	S	Q	R	L	Y	S
Template Known Secondary structure																		T	T					G	G	G										T	T	T			S	S																				T	T	S
Template Predicted Secondary structure
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	E	E	I	G	V	V	C	Q	Q	A	G	G	H	A	A	F	V	D	A	G	K	L	L	P	H	I	P	A	D	Q	F	P	A	Q	A	L	A	C	E	L	Y	K	V	A	G	I	R	A	V	E	I	G	S	F	L	L	G	R	D	P	K	T	G	K	Q	L	P	C	P	A	E	L	L	R	L	T	I	P
Query Conservation
Alig confidence																				.	.																							.									.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Conservation																				.	.																							.									.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Sequence		W	A	Q	E	R	P	Y	T	T	P	F	V	T	D	P	G	L	R	.	.	S	Q	V	V	G	T	I	D	F	V	D	D	V	D	A	G	T	V	A	K	I	L	.	R	A	N	G	I	V	D	T	.	.	.	.	.	.	.	.	.	.	.	.	.	E	P	Y	R	K	L	G	R	N	Q	L	R	V	A	M	.
Template Known Secondary structure						S	T	T				S			S	G	G	G	B	.	.		S	S								T	T	S										.			T	T		B			.	.	.	.	.	.	.	.	.	.	.	.	.	S			T	T	T			S							.
Template Predicted Secondary structure																				.	.																							.									.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template SS confidence
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.			.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330		.	.	.	.	.	.	.	.														.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
		424	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	T	Y	T	Q	T	H	M	D	F	I	I	E	A	F	K	H	V	K	E	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	P	A	V	E	P	D	D	V	S	A	L	T	E	C	V	D	W	V	V	E	R
Template Known Secondary structure			T	T	S																		T
Template Predicted Secondary structure
Template SS confidence
		354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions