Job Description P0A853 Confidence 99.94% Date Thu Jan 5 11:06:55 GMT 2012 Rank 82 Aligned Residues 364 % Identity 15% Template c2cb1A_ PDB info PDB header:lyase Chain: A: PDB Molecule:o-acetyl homoserine sulfhydrylase; PDBTitle: crystal structure of o-actetyl homoserine sulfhydrylase2 from thermus thermophilus hb8,oah2. Resolution 2.0 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.			.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																																																.			.	.
Query SS confidence																																																.			.	.
Query Sequence		E	E	A	I	I	K	S	G	M	N	P	F	L	L	D	S	E	D	V	F	I	D	L	L	T	D	S	G	T	G	A	V	T	Q	S	M	Q	A	A	M	M	R	G	D	E	A	.	Y	S	.	.	G	S	R	S	Y	Y	A	L	A	E	S	V	K	N	I	F	G	Y	Q	Y	T	I	P	T	H	Q	G	R	G
Query Conservation																																																.			.	.
Alig confidence																								.																								.			.	.
Template Conservation																								.
Template Sequence		T	T	L	A	V	L	A	G	L	P	E	D	P	H	G	A	V	G	L	P	I	Y	.	A	V	A	A	Y	G	F	K	T	L	E	E	G	Q	E	R	F	A	T	G	E	G	Y	V	Y	A	R	Q	K	D	P	T	A	K	A	L	E	E	R	L	K	A	L	E	G	A	L	E	A	V	V	L	A	S	G	Q	A
Template Known Secondary structure								T	T					T	T			S	S					.			S	B				S	S													S		S	B	T	T	T																	T		S						S	S
Template Predicted Secondary structure																								.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	Q	I	Y	I	P	V	L	I	K	K	R	E	Q	E	K	G	L	D	R	S	K	M	V	A	F	S	N	Y	F	F	D	T	T	Q	G	H	S	Q	I	N	G	C	T	V	R	N	V	Y	I	K	E	A	F	D	T	G	V	R	Y	D	F	K	G	N	F	D	L	E	G	L	E	R	G	I	E	E	V	G
Query Conservation
Alig confidence																														.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Template Conservation																														.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Template Sequence		A	T	F	A	A	L	L	A	L	L	R	P	G	D	E	V	V	A	A	K	G	L	F	G	Q	T	I	G	.	.	.	.	.	L	F	G	Q	V	L	S	L	M	G	V	T	V	R	Y	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	E	P	E	A	V	R	E	A	L	S	A	.	.
Template Known Secondary structure									T	T			T	T							T	T								.	.	.	.	.					T	T	T	T	T	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S										T	.	.
Template Predicted Secondary structure																														.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110						.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.																	.	.	130	.	.	.	.	.	.	.	.	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	N	N	V	P	Y	I	V	A	T	I	T	S	N	S	A	G	G	Q	P	V	S	L	A	N	L	K	A	M	Y	S	I	A	K	K	Y	D	I	P	V	V	M	D	S	A	R	F	A	E	N	A	Y	F	I	K	Q	R	E	A	E	Y	K	D	W	T	I	E	Q	I	T	R	E	T	Y	K	Y	A	D	M	L
Query Conservation
Alig confidence		.	.																.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.
Template Conservation		.	.																.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.
Template Sequence		.	.	K	T	R	A	V	F	V	E	T	V	A	N	P	A	L	.	.	.	.	L	V	P	D	L	E	A	L	A	T	L	A	E	E	A	G	V	A	L	V	V	D	N	T	F	G	A	.	.	.	.	.	.	.	.	.	.	.	A	G	A	L	C	R	P	L	A	W	G	.	.	.	.	.	.	A	H	V	V
Template Known Secondary structure		.	.	T								S	S		T	T	T		.	.	.	.																T								G	G	G	T	.	.	.	.	.	.	.	.	.	.	.	T	T	T	S			G	G	G	G	T	.	.	.	.	.	.		S
Template Predicted Secondary structure		.	.																.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.
Template SS confidence
				140	.	.	.	.	.	.	.	.	.	150	.	.	.	.					.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.												.	.	.	.	.	.	.	.	190	.	.							.	.	.	.
		265	.	.	.	.	270	.	.	.	.	.	.	.			.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.													.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure															.	.																												.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.																												.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	M	S	A	K	K	D	A	M	V	P	M	G	.	.	G	L	L	C	M	K	D	D	S	F	F	D	V	Y	T	E	C	R	T	L	C	V	V	Q	E	G	F	.	.	.	.	.	.	.	.	.	.	.	.	P	T	Y	G	G	L	E	G	G	A	M	E	R	L	A	V	G	L	Y	D	G	M	N	L	D	W
Query Conservation															.	.																												.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.																												.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Template Conservation																																																																													.	.
Template Sequence		V	E	S	L	T	W	A	S	G	H	G	S	V	L	G	G	A	V	L	S	R	E	T	E	L	W	R	N	Y	P	Q	F	L	Q	P	W	E	A	L	R	A	R	C	F	P	E	R	V	R	T	L	G	L	S	L	C	G	M	A	L	S	P	F	N	A	Y	L	L	F	Q	G	L	E	T	V	.	.	A	L	R
Template Known Secondary structure									S		S	S													S	G	G	G	G	S	G	G	G	G							G	G	G											T	T	T	T																G	G	G		.	.
Template Predicted Secondary structure																																																																													.	.
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.			.	.	.
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.								.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.
Query Sequence		L	A	Y	R	I	A	Q	V	Q	Y	L	V	D	G	L	E	E	I	.	.	.	.	.	.	.	G	V	V	C	Q	Q	A	G	G	H	A	A	F	V	D	A	G	K	L	L	P	H	I	P	A	D	Q	F	P	A	Q	A	L	A	C	E	L	Y	K	V	A	G	I	R	A	V	E	I	G	S	F	L	L	G	R
Query Conservation																				.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	A	R	M	S	E	T	A	R	F	L	A	E	R	L	Q	G	H	P	K	V	K	A	L	R	Y	P	G	L	P	E	D	P	A	H	R	N	A	R	K	Y	L	A	S	G	G	P	I	L	T	L	D	L	G	D	L	E	R	A	S	R	F	L	G	A	I	R	L	L	K	A	A	N	L	G	D	A	R	T	L
Template Known Secondary structure																		T		T	T		S					T	T	S	T	T		T	T									S	S	S		S							S	S												S	S				S			S		S	S
Template Predicted Secondary structure
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
		404	.	.	.	.	.	410	.	.	.	.	.													.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	P	K	T	G	K	Q	L	P	C	P	A	.	.	.	.	.	.	.	.	.	.	.	.	E	L	L	R	L	T	I	P	R	A	T	Y	T	Q	T	H	M	D	F	I	I	E	A	F	K	H
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.											.
Template Conservation																																				.
Template Sequence		L	V	H	P	W	T	T	T	H	S	R	L	K	E	E	A	R	L	Q	A	G	V	T	P	G	L	V	R	V	S	V	G	L	E	.	D	P	L	D	L	L	A	L	F	E	E	A	L	E	A
Template Known Secondary structure					T	T	T	T	T	T	T	T	S								T	T			T	T								S	S	.
Template Predicted Secondary structure																																				.
Template SS confidence
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.		.	.	.	400	.	.	.	.	.	.	.	.	.	410	.